Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1930 ATGCCTCCTCCATTTGATTCTATTTCTAAGATCCACCCTCATAGGGAGGCATGGAGACTTAAAGTTAAGTCGAACAAAATCCAAGCAACTGTTAAGAAGCAGCTCATAAATAGGTTTAAAGAGAATATTATTGAGGGTCAAACATACCAAATGTCATATTTTAGTGTTGTTCCAAACCAAGTCAACTATAGGGCAGTAGAACATGAGTTTAAGTTGGTTTTCCATAACCGTACAACTGTTATTTCTGTCCTTGATGATGCCATTCCCAAGACATGTTTCAGTTTTTGTCCATTTGATGAGCTCTTGAAAATGACTGAAGATTATGTTTACTTAGTTGATGTTATTGGTTTGCTAACTTCTGTCGGTGAAGAGAAAGAGTATGTGAAAGACGGCAAAGTGATGAAGAAG 408 0.3676 MPPPFDSISKIHPHREAWRLKVKSNKIQATVKKQLINRFKENIIEGQTYQMSYFSVVPNQVNYRAVEHEFKLVFHNRTTVISVLDDAIPKTCFSFCPFDELLKMTEDYVYLVDVIGLLTSVGEEKEYVKDGKVMKK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1930 136 Gene3D - 23 85 IPR012340 -
Amo19g1930 136 Pfam Domain of unknown function DUF223 25 105 IPR003871 -
Amo19g1930 136 SUPERFAMILY Nucleic acid-binding proteins 3 86 IPR012340 -
Amo19g1930 136 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 25 108 - -
Amo19g1930 136 Gene3D - 87 136 IPR012340 -
Amo19g1930 136 CDD RPA1_DBD_A_like 23 80 - -
Amo19g1930 136 PANTHER DNA BINDING PROTEIN-LIKE 25 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1930 Amo-Chr19 63842081 63842810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1930 20 121 Core DNA Replication Machinery Family AT2G06510 29.808 1.39e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1930 - - ahf:112778577 239.195