Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1922 ATGTGGCTATACCTTGTCTTCATCGTCGCGATCGAACCCAGCCCTGGTCGCCTGTCTCTGTGGCGGTGCTGCTCGCCTCATCTTCTCGAACCCAGCCCTGGTCGTGGTGCTCCTCGCCTGTCTCTGTCGCGGTGCTGCTCGCCTCATCTTCTCAAACCCAGCCCTGGTCGTGGTGCTCCTCGCCTGTCTCTGTCGCGGTGCTCCTTGCCTGTCTCTGTCGCGGTGCTGCTCGCCTCATCTTCTCGAACCCAACCCTGGTCGTGGTCCTGCTTGCCTCTCTCTGTCGCGGTTCTGCTCAGCCTCATCATCTCCAACCCAGCCCTGGTCGTGGTGCTGCTCGCCTCTCTCTGTGTCGCGGTTCTGCTCGCCTCTCATCCCGCATCTAGCATCAAGTATCCTCCTTGTTACAAGGACATCCGTTTCTGGATCAAGGAATCATTTACTGAAAACATTCTGTGTGAACTTGTTAGAGGAATTGCTGGGGATATTGTAGAAGAGACTGACACAGCCTCAGTGTTGTTAAAAGCTATTGGGTATATCAGATTCCTTCAAAGTCAAATTGAG 564 0.5479 MWLYLVFIVAIEPSPGRLSLWRCCSPHLLEPSPGRGAPRLSLSRCCSPHLLKPSPGRGAPRLSLSRCSLPVSVAVLLASSSRTQPWSWSCLPLSVAVLLSLIISNPALVVVLLASLCVAVLLASHPASSIKYPPCYKDIRFWIKESFTENILCELVRGIAGDIVEETDTASVLLKAIGYIRFLQSQIE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1922 188 SUPERFAMILY Anticodon-binding domain of PheRS 131 168 IPR036690 -
Amo19g1922 188 Gene3D - 127 172 IPR036690 -
Amo19g1922 188 CDD bHLH_AtbHLH_like 143 188 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1922 Amo-Chr19 63034496 63036236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1922 166 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 82.609 3.88e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1922 K01889 - aip:107608127 178.333