Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1899 ATGTGTGTGATAAGAACAAAACGTAGTGTCGTTAAGCCAGCTGAAGAGACACCATTGACCACACTAGACCTATCATTGATCGATAAGATACCTGTTCTAAGGTGCGATGCCAGAACGTTGCATGTGTTCAGCCATGGCCCTGAAGCTGCAAGTGTCATAAGAGAAGCCTTGTCTAGAGCATTGGTTCCTTATACCCTCTTGCTGGGCGCCTCATTCACAAATCGGAACAAAATGATGAAGCAGGGTGCCTCCAAGTTCAATGCTCCGGGGACGTCTATTCCGTATGATCATCTTCTTCCTGATGATGTTCCTCAAACCGAAGGCATTGACCCCCTTGTCAAAATGCAGGTGACACAATTTGGATGTGGAGGATTTGTGATAGGCCTCGTATTCTGCCACACCATATGCGATGGCCTTGGTGCTGCTCAATTTCTCAACGCCGTAGGGGAGCTAGCTAGAGGTCTTCACAACCCCACCATTGAACCGCTCTGGCACAGACACTTCGCTCCCTCACCACCACCATCACCGTCGCCACCTCCACTCCCTAAACTACCACCAACCATGCCAAGCTACAAGCTAGAACACGCTACCGTAGACATCCCCATGCATCGAATCAACAACCTCAAGCAAGACTTTCAGCGGCTCACCGGACTCGCTTGCTCTTCCTTCGAAATCGTAGCCGCGGGATTATGGACAAGCAGAGCAAGAGCCATTGATTTCGAATCCAACGCCGAGCTGAAGCTTGTGTTCTTCGCTAACTGCCGTCAAATCTTGGACCCTCCTCTCCCCGCTGGCTTCTACGGCAACTGTTTCTTCCCAGTGACGATCACCGCTTCCTACGAGTCGCTCAGAGACGCGTCGCTCTTCGATGTGGTGAAAATGATACAAGATGCAAAGACCAAATTACCGTCCGAGTTTGGCAAGTATTTGAAGGGTGACTGTTGGGATGACCCTTTTGCCCCTCCTTTGAGCTACAGGACGCTCTTCATATCGGAGTGGGGGAGGCTGGGATTCAACCAAGTTGACTTCGGGTGGGGTCCACCGGTACACGTGGTGCCCATACAAGGGTCAAGCATAATCCCCGTAGGAATTGTGGGGTACATGCCTCTCACCCTCCTCCCAAACAAAGGAATTCGTTTGATGACGTGGTGCGTTGAACAAGATCATCGCCATCCCTTCCTCCATCAAATGCATGCTCTCATGGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATTATTATTATTATTTTTACTATTATTATTATAAGCTCTTTTTTAATATCTCTCAATCAATAA 1311 0.4744 MCVIRTKRSVVKPAEETPLTTLDLSLIDKIPVLRCDARTLHVFSHGPEAASVIREALSRALVPYTLLLGASFTNRNKMMKQGASKFNAPGTSIPYDHLLPDDVPQTEGIDPLVKMQVTQFGCGGFVIGLVFCHTICDGLGAAQFLNAVGELARGLHNPTIEPLWHRHFAPSPPPSPSPPPLPKLPPTMPSYKLEHATVDIPMHRINNLKQDFQRLTGLACSSFEIVAAGLWTSRARAIDFESNAELKLVFFANCRQILDPPLPAGFYGNCFFPVTITASYESLRDASLFDVVKMIQDAKTKLPSEFGKYLKGDCWDDPFAPPLSYRTLFISEWGRLGFNQVDFGWGPPVHVVPIQGSSIIPVGIVGYMPLTLLPNKGIRLMTWCVEQDHRHPFLHQMHALMDYYYYYYYYYYYYYYIIIIIFTIIIISSFLISLNQ* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1899 436 Gene3D - 3 73 IPR023213 -
Amo19g1899 436 MobiDBLite consensus disorder prediction 167 186 - -
Amo19g1899 436 Pfam Transferase family 5 69 - -
Amo19g1899 436 Pfam Transferase family 97 354 - -
Amo19g1899 436 Gene3D - 74 178 IPR023213 -
Amo19g1899 436 PANTHER ACYL TRANSFERASE 4 89 399 - -
Amo19g1899 436 PANTHER ACYL TRANSFERASE 4 1 71 - -
Amo19g1899 436 Gene3D - 179 393 IPR023213 -
Amo19g1899 436 PANTHER ACYL TRANSFERASE 4 89 399 - -
Amo19g1899 436 PANTHER ACYL TRANSFERASE 4 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1899 Amo-Chr19 60217670 60220448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1899 9 360 Monolignol Biosynthesis Gene Families AT5G48930 28.186 2.10e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1899 - - gmx:100783128 533.872