Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1897 ATGGAGAGAGAGGACGAAGATGCGACGCAAGAGAGGAGGCTGTTCCGCCGTGCACCGTCGTCGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTCGGGCTCGCCGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCATGGCAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCTTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATCTTAA 345 0.5014 MEREDEDATQERRLFRRAPSSLLGSIEAAAAARARRNNADRFLNWSTRFQIVLGMARGLQYLHEDSHLRIVHRDIKASNILLDHKFHPKIGDFGLARFFLEDQAYLSTQFAGTS* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1897 114 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 38 113 - -
Amo19g1897 114 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1897 114 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 38 113 - -
Amo19g1897 114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Amo19g1897 114 Pfam Protein kinase domain 49 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1897 114 Gene3D Transferase(Phosphotransferase) domain 1 24 114 - -
Amo19g1897 114 SUPERFAMILY Protein kinase-like (PK-like) 40 113 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1897 Amo-Chr19 60105327 60106021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1897 43 113 Receptor kinase-like Gene Family AT1G70530 63.380 4.57e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo19g1897 Pkinase 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1897 - - ahf:112703114 177.948