Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1895 ATGGCTTCACCCACACCCTCTTCCCACCACAACTACTTCCACCGATTCCGCCGCCGCCGAACCGGACCTCACCTCCGCCGCCGTCCGGTGCCCCTTGGACCGCGGATACCTAATAAACTCCGATCTGCAACGAGAAATCTGGTCGCACCTCTTCTCGTCAATCCTGCGCATAAACCCAACGCAGTCCTCCTTCTCGTCACCGAACCCTTGTTCACTCTTCCCTCCATTCAGCGCTCACTGGACGAGCTCGTCTTCGAAGATTTCAATTTTAGGGCACTGTACGTGGCCGATTCCCCCTCGCTGGTGCACCTGTACGAAGCAAGCTGCAGGGCCAACGGGCTTGTGTCTTGGGCCCAGTGCAGCCTCGTTGTTGATTGCGGGTTCTCTTTCACTCATGCTTCGCCTGTGTTTCAGAATTTCACGCTGAATTATGGTGTTAAGAGAATTGATTTGGGTGGGAAGGCGCTTACTAATTACCTGAAGGAGCTTGTTTCATTTCGGTCTGTTAATGTGATGGAGGAGACCTTCCTCATTGACGATGTCAAAGAGAAGCTCTGTTTCGTCTCCCTTGATGTGCCACGCGATCTCCGCCTTGCCAGGGAAAGTGGAAAAGAAAATCTCTTCAGGTGCACATATGTGCTTCCTGATGGTATCACATACACCAAGGGTTTTGTTAAGCATCCAGAGCGAATGCACAACTATCTTGCCTTGAAGGATGGCACTTGTGCCTTTCCTCCTCTTCCAGAGGAAACAAAGGGGAATATGAACCGCTCGGAAATTGCTGAGATGCCTCAAGACCGAAACGGAATTGATCTATCGAAAAATGAATTCGACTTGACAAAAGAACGGTTTCTTGTCCCTGAGATGATCTTCCAGCCTGCCAATTTGGGTATGAATGAAGCTGGGCTAGCAGAATGTATTGTTCGAGCTGTCAATTCGTGCCATCCACATCTCCACCATGTACTCTATGAAAGCATAATTTTAACCGGCGGAAGCACTCTGTTTCCTCAGTTTTCTGAGAGATTAGAGAAGGAGCTCCGACCACTAGTTCCTGATGACTATCATGTGAAGATAACTACTCAAGAAGATCCCATACTAGGTGGTTGGCGTGGAGGATCTCTGTTGGCGTCAAGTCCAGATTTTGAAGCAATGTGTGTAACTAAGTCTGAGTATGAGGAGCTTGGTTCTGTTAGATGTCGCAAGAGATTCTTTCATTAG 1218 0.4893 MASPTPSSHHNYFHRFRRRRTGPHLRRRPVPLGPRIPNKLRSATRNLVAPLLVNPAHKPNAVLLLVTEPLFTLPSIQRSLDELVFEDFNFRALYVADSPSLVHLYEASCRANGLVSWAQCSLVVDCGFSFTHASPVFQNFTLNYGVKRIDLGGKALTNYLKELVSFRSVNVMEETFLIDDVKEKLCFVSLDVPRDLRLARESGKENLFRCTYVLPDGITYTKGFVKHPERMHNYLALKDGTCAFPPLPEETKGNMNRSEIAEMPQDRNGIDLSKNEFDLTKERFLVPEMIFQPANLGMNEAGLAECIVRAVNSCHPHLHHVLYESIILTGGSTLFPQFSERLEKELRPLVPDDYHVKITTQEDPILGGWRGGSLLASSPDFEAMCVTKSEYEELGSVRCRKRFFH* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1895 405 Gene3D - 368 395 - -
Amo19g1895 405 Gene3D - 59 98 - -
Amo19g1895 405 PANTHER ACTIN 63 400 IPR004000 -
Amo19g1895 405 SUPERFAMILY Actin-like ATPase domain 119 404 IPR043129 -
Amo19g1895 405 Pfam Actin 58 404 IPR004000 -
Amo19g1895 405 Gene3D - 301 367 - -
Amo19g1895 405 Gene3D - 99 150 - -
Amo19g1895 405 PANTHER ACTIN-RELATED PROTEIN 6 63 400 IPR030054 GO:0005634|GO:0006338
Amo19g1895 405 Gene3D Actin; Chain A, domain 4 273 300 - -
Amo19g1895 405 Gene3D Actin; Chain A, domain 4 151 222 - -
Amo19g1895 405 SUPERFAMILY Actin-like ATPase domain 59 103 IPR043129 -
Amo19g1895 405 SMART actin_3 5 404 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1895 Amo-Chr19 59772138 59777235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1895 51 403 Cytoskeleton Gene Families AT5G09810 27.119 9.19e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1895 K11662 - gmx:100819827 562.762