Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1887 AGATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCCAGTTTCGGATTGGCGAATCTTTTCTCCAGGCCCGGTGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGGTAGGCTCTGGGCCTTGTGGCTTTGCCAAACATTCGCTGGTGTCCTCTGCATAATTCTTGGGCTTGTTGGATCTTTGAGTGTTTCTGTTGTTGTTATGATCATATTCTCTGTGTTTGTTCTAGCTACTTGTGGCATGACCTTTGGAATTGTTCCTTTTGTCTCAAGACGGTCTTTTCTTGGGTCTTCTGATTGTGATTTTCCTATCAGAACACTTGCAAGGGGGTATTGA 354 0.452 RFNLKLHTAGIIAASFGLANLFSRPGGGFISDAVSKRFGMRGRLWALWLCQTFAGVLCIILGLVGSLSVSVVVMIIFSVFVLATCGMTFGIVPFVSRRSFLGSSDCDFPIRTLARGY* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1887 117 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 1 100 - -
Amo19g1887 117 SUPERFAMILY MFS general substrate transporter 2 102 IPR036259 -
Amo19g1887 117 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 100 IPR044772 GO:0015112
Amo19g1887 117 Gene3D MFS general substrate transporter like domains 1 104 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1887 Amo-Chr19 59494151 59494771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1887 1 99 Inorganic Solute Cotransporters AT1G12940 70.707 9.57e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1887 K02575 K22191 ahf:112727541 171.785