Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1882 ATGCTTCTCTCTATCTCAGTTCTCACACCAAAGCTTCAGTTATTTATAACAATGGAGGAGAACGGAGCGCTCTTCCTCTTCTCTCTCTCACTTCTACTTCTCCCGCTTTCCTCCTCTTCCGCTCAGATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTTCAGAAAATTTCACTGATGAGATTGGTCTTAAATGGAGCCCTGATGATAAGCTTCCTTATGGAGAAGTAAGCACCATATCAGTTGCGAACGAGACACGGCGGCAGTACACCACGCTTAGACACTTCCCTGCTGATACCAAGAAATACTGCTACACACTTGATGTTGTGAGCAGGACAAGGTACCTACTGAGGGCCGCATTCCTGTATGGGAACTTTGATAATAACAATGTTTATCCTAAATTTGACATTTCTGTTGGGGCTACACATTGGTCTACCATTGTTATATCAGATGCTAACCTTATAGAAATGAGAGAGCTTATATTTTTGGCCTCAAGTTCTGCTGTGAGTGTGTGCTTATCGAACGCCACAACAGGGCAGCCGTTCATATCTACACTTGAGCTCCGGCAATTCAATGGTTCAGTTTATTATACACAATATGAGGAACAATTTTACCTCAGTGTCTCTGCACGGATAAATTTTGGAGCAGAAAGTGATGCTCCAATCAGGTATCCTGATGATCCTTTTGATAGAATATGGGAGTCAGATTCTGTGAAGAAAGCAAATTTTCTTGTTGATGTTGCTGATGGTACCAAGAAAATCTCTACCGAAGTACCAATTGATGTTAACAGAGACGAAATACCCCCAGTGAAAGTGATGCAGACAGCAGTAGTTGGCACAAATGGGTCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCTCTTATTGTGCAGAAATTGAAGATTTGGGTCCAAATGATTCCAGAAAATTTAGGCTAGTACTTCCAGGCCAGCCTGATATTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAGGGAAAATATCGCCTCTATGAACCAGGATTTAACAACATATCCCTGCCCTTTGTGCTTTCTTTTAGATTTGGCAAGACCTCTGATTCTTCCAAGGGTCCTCTCCTAAATGCAATGGAGATAAATAAATATTTGGAGAAAAATGATGGCTCTATTGATTTAGCAGCTGTTTCTAGTGTATTGTCACACTACCCTTCGGCAGATTGGGCACAAGAGGGAGGGGACCCTTGTCTACCTGTTCCATGGTCATGGATCCGCTGTAATTCYGATCCWCAACCAAAAGTAGTTTCAGTCTTATTGTCCGGTAAAAACCTGACTGGAAATYTTCCTTTGGATATCACCAAARTGACTGGTCTAGTTGAACTATGGCTTGATGGAAACATGTTAACTGGCCCAATACCAGATTTTACTGGGTGCATGYACWTAAAGATCATTCATCTTGAGAACAATCAGTTGACGGGTGTCCTCCCAACATCTCTGCTGAACCTTCCAAATTTAGGAGAAATGTATGTGCAAAATAATTTGTTATCTGGAACAATACCATCTGCTCTTCTGAGCAAAGATTTGGTTTTAGACTACTCTGGAAACATTAATCTTCACAGGGGGAAAAGAATAGAGGGCAAAACGTATGTTATTATCGGTTCCACAGTGGGGGCTTCTGTTCTACTATTGGCCACTATTATATCTTACTTGTTTATGCGTAAAGGAAATAGAAGGTATTTTGAGCAAGATCACAACTCTTCTCTCCCTACTCAAAAGCTGGCTTCCTGGAAAAATGATGATGCTGCAGAAACTGCTCACTGCTTCAGTTTTTCCGAAATTTTAAATGCCACAAATAATTTTGAGAAAAAGATTGGTTCTGGTGGTTTTGGAGTTGTGTACTACGGGAAACTGAAAGATGGAAAAGAGATAGCTGTAAAAGTTTTGACCAATAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACACTTCTTTCAAGAATACATCACAGAAATTTGGTACAGCTTCTTGGGTATTGCCGGGAGGAAGATAGTAGCATGCTCGTTTATGAATTCATGCACAATGGAACTCTCAAGGAACATCTCTATGGTCCATTAACGCATGGACGGAGTATCAATTGGATTAAGCGGCTTGAGGTTGCAGAAGATGCTGCAAAAGGGATTGAATACCTTCATACGGGTTGTYTTCCTGTRGTTATCCATAGAGATGTAAAAAGCAGCAATATTCTTCTTGACAAGCAAATGAGAGCTAAGGTCTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGKGTTTCCCATGTTTCTAGCATAGTTCGGGGGACACACCTGTACTCTTATCTGGTGTCACAAATCTCATTAAAATCAACCAACGGCTCATCCATGTCTATTATGGCTGAATTAATAGAACCGCAAATGATAACACAAACAATACATCTTTTTTTTTTTCATCTTGGACTCTCCTATCATGCACTACAAAACCAAACTAAGTTACTCACACTCACTTTCACTTATAAAGCCTTTAAGCATCTTGGAACCCACAACTTTTCCCTAAATGAAACCTTCAAAGGCTTAGAAACCCCTCCCGAAATAGTAAATCCTCATTGTTTCACCCTCAAAGTCTCTTCCCCGTGTCACTCCACGCTCATCCTTCAAATTTCAAATTGTAAAACAGAATACGGAGTACGTACTCCCACTATAGGTGTATTGTGTGTTGAGAAATTATAA 2745 0.4055 MLLSISVLTPKLQLFITMEENGALFLFSLSLLLLPLSSSSAQMQGFVSLDCGGSENFTDEIGLKWSPDDKLPYGEVSTISVANETRRQYTTLRHFPADTKKYCYTLDVVSRTRYLLRAAFLYGNFDNNNVYPKFDISVGATHWSTIVISDANLIEMRELIFLASSSAVSVCLSNATTGQPFISTLELRQFNGSVYYTQYEEQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANFLVDVADGTKKISTEVPIDVNRDEIPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFSYCAEIEDLGPNDSRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFNNISLPFVLSFRFGKTSDSSKGPLLNAMEINKYLEKNDGSIDLAAVSSVLSHYPSADWAQEGGDPCLPVPWSWIRCNSDPQPKVVSVLLSGKNLTGNXPLDITKXTGLVELWLDGNMLTGPIPDFTGCMXXKIIHLENNQLTGVLPTSLLNLPNLGEMYVQNNLLSGTIPSALLSKDLVLDYSGNINLHRGKRIEGKTYVIIGSTVGASVLLLATIISYLFMRKGNRRYFEQDHNSSLPTQKLASWKNDDAAETAHCFSFSEILNATNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDSSMLVYEFMHNGTLKEHLYGPLTHGRSINWIKRLEVAEDAAKGIEYLHTGCXPVVIHRDVKSSNILLDKQMRAKVSDFGLSKLAVDGVSHVSSIVRGTHLYSYLVSQISLKSTNGSSMSIMAELIEPQMITQTIHLFFFHLGLSYHALQNQTKLLTLTFTYKAFKHLGTHNFSLNETFKGLETPPEIVNPHCFTLKVSSPCHSTLILQISNCKTEYGVRTPTIGVLCVEKL* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1882 914 Gene3D Transferase(Phosphotransferase) domain 1 692 814 - -
Amo19g1882 914 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Amo19g1882 914 PANTHER TYROSINE KINASE DOMAIN PROTEIN 29 811 - -
Amo19g1882 914 ProSiteProfiles Protein kinase domain profile. 616 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1882 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Amo19g1882 914 SUPERFAMILY Protein kinase-like (PK-like) 602 784 IPR011009 -
Amo19g1882 914 Pfam Protein tyrosine and serine/threonine kinase 618 767 IPR001245 GO:0004672|GO:0006468
Amo19g1882 914 PANTHER OS07G0107800 PROTEIN-RELATED 29 811 - -
Amo19g1882 914 Gene3D Ribonuclease Inhibitor 391 541 IPR032675 -
Amo19g1882 914 Gene3D Phosphorylase Kinase; domain 1 590 691 - -
Amo19g1882 914 SUPERFAMILY L domain-like 432 529 - -
Amo19g1882 914 SMART serkin_6 616 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1882 914 Pfam Malectin-like domain 49 379 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1882 Amo-Chr19 59231397 59238339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1882 36 726 Receptor kinase-like Gene Family AT2G37050 67.622 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g1882 Malectin_like 8.8e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1882 - - gmx:100784017 1331.62