Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1845 AAGCGGAAGAAGCTCAACAAGGTCTGGCCAAACCTCACACAAAACAGAACCACCCAGAAAAGAAAGAAAGAAAGTATGTGTTCATCGCTGAAGGGGCAATACGAGATAAGCGAAGAAATAGGGAGAGGGCGTTTCGGCACAATATACCGGTGCTACGACGTCGTTTCAGGAGAAGTATACGCCTGCAAAGTAATCGACAAATCAATCCTAGCAGACGAAACGGACCAGCAGTGTATACTGAACGAACCGAAGCTGATGTCACTCCTAACCCCTCACCCTAACATCCTCACTATCCACAACGCCTTCGAAGACGACCGCTCTCTCTCTCTCATCCTCGACCTCTGCCTTCCCCTCACCCTCCTCGACCGCCTAACTGCCTCAACTGTCACTCCATTCCCCAACGCCTGCCACGTCATCACCCAGCTTCTAGAAGCCGTTTCTCACTGCCACCGCAGCGGCATCGCGCATCGCGACTTGAAGCCCGAGAATATTCTCTTTGATTCCAGAGACATCTTGAAGCTCGCCGACTTTGGCTCCGCCGAGTGGTTCGCCGGCGATGGCGGGGGTCTGATGAGCGGTGTGGTGGGGACGCCGTATTACGTGGCGCCGGAAGTGTTGATGGGGAGGGAGTATGATGAGAAAGTTGATGTGTGGAGCTGTGGAGTTATACTTTACATGATGTTGGCCGGTGCGCCGCCGTTTTACGGTGATTCCGCCGTCGAGATTTTCGAGTCTGTTCTTCGAGGGAACTTGAGGTTTCCGCCGAGGCTCTTCCGGAATGTGTCGCCGGCCGCCAAGGATTTGTTGCGGAAGATGATATGTAAGGACCCTTCTAGGAGGATCTCCGCCGAACAAGCCTTGAGGCACTCATGGATCTTGAGGGGAGGTGAGAGTGAGGCAGCTGAACTAACTTGA 915 0.5366 KRKKLNKVWPNLTQNRTTQKRKKESMCSSLKGQYEISEEIGRGRFGTIYRCYDVVSGEVYACKVIDKSILADETDQQCILNEPKLMSLLTPHPNILTIHNAFEDDRSLSLILDLCLPLTLLDRLTASTVTPFPNACHVITQLLEAVSHCHRSGIAHRDLKPENILFDSRDILKLADFGSAEWFAGDGGGLMSGVVGTPYYVAPEVLMGREYDEKVDVWSCGVILYMMLAGAPPFYGDSAVEIFESVLRGNLRFPPRLFRNVSPAAKDLLRKMICKDPSRRISAEQALRHSWILRGGESEAAELT* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1845 304 PIRSF ILK 3 288 - -
Amo19g1845 304 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Amo19g1845 304 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 300 - -
Amo19g1845 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Amo19g1845 304 CDD STKc_CAMK 33 291 - -
Amo19g1845 304 SUPERFAMILY Protein kinase-like (PK-like) 29 293 IPR011009 -
Amo19g1845 304 ProSiteProfiles Protein kinase domain profile. 34 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1845 304 Gene3D Transferase(Phosphotransferase) domain 1 24 303 - -
Amo19g1845 304 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 29 300 - -
Amo19g1845 304 SMART serkin_6 34 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1845 304 Pfam Protein kinase domain 34 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1845 Amo-Chr19 56112035 56113671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1845 34 298 EF-hand Containing Proteins AT1G50700 39.552 1.19e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo19g1845 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1845 - K08794 adu:107465518 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1845 19 56112035 56113671 Amo09g1411 09 46571879 46573298 hybridization