Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1814 ATGGGGGTTTGCACTTCAAAGCCTCACAAACCCAACCCTTACGCTTCTCGGGAACCTGAAGCTGAACCTTACGATCCCTCACAGCAAATCCCCAAAACCCCTCTCACTCCCTCCGGTGGCCGGAAAGATGACGTCATCGCCGGTAAACAGTCGCCGTTCTTCCCCTTCTACAGCCCAAGCCCTGCACACTTCCTCAAGAAGTCTCCGGCGACCGGAGGAGGGAACAAGAGTGCCAGCTCGACGCCGAGGAGGTTTTTCAGGCGACCGTTCCCGCCTCCGTCGCCGGCGAAGCACATAAGGGCTGTGTTGGCTAGACGGCAGGGAAAGAAAGCGGCAACGGCAATACCGGAGGAAGGAGAGGAGGACGGCGGAGGAGGTGCCGCCGATTTGGATAAGAGATTCGGATTCTCGAAGGAGTTCACTAGTAGGCTTGAGGTTGGGGAAGAAGTGGGTCGAGGGCATTTTGGGTATACTTGTTCTGCTAGGTACAAGAAGGGTGAGCTTAAGGGTCAGCAAGTTGCTGTTAAAGTCATCCCAAAAGCTAAGATGACAACAGCAATTGCAATTGAAGATGTGAGAAGGGAGGTTAAAATATTGCGAGCTTTGAACGGACATAAGAATCTGGTACAATACTATGATGCATTTGAAGATCAAGATAATGTCTACATTGTGATGGAGTTATGCGAAGGTGGCGAGCTTTTGGATAGGATACTATCAAAAGGAGGGAAATACTCAGAAGATGATGCGAAGGCTGTGATGGTACAAATACTAAATGTTGTCGCATTTTGTCATCTTCAGGGTGTGGTGCATCGAGATCTTAAGCCAGAGAATTTTCTGTATACGTCGAAGGATGAAAGTTCAGAGTCAGAATTAAAAGCAATTGACTTTGGGTTATCTGACTTTGTCCGACCAGATGAAAGGCTTAATGACATTGTTGGAAGTGCATACTATGTGGCCCCAGAAGTTCTCCATAGATCGTACAGCACTGAGGCTGATGTGTGGAGCATAGGCGTGATCGCATATATTCTTTTGTGTGGTAGTCGCCCATTTTGGGCCCGAACGGAGTCTGGTATCTTTAGGGCAGTTTTGAAAGCTGATCCCAGCTTCGATGAGGCTCCTTGGCCTTCTTTATCTACAGAAGCAAAAGATTTTGTCAAACGCCTACTGAATAAGGATCCACGGAAACGAATATCTGCTTCTCAAGCTCTAAGTCACCCTTGGATAAGGAATTACAATAATGTAAAAGTCCCACTTGATCTTTTAATATTTAAGCTCATGAAAATCTATATGCGATCATCATCCTTGCGTAAGGCTGCTTTAAGGGCCTTGTCCAAGACATTAACTGCTGATGAACTCTATTATCTAAGGGAGCAATTTGCATTGTTAGAACCAAGCAAAAATGGGAGCATATCCTTAGAAAACATTAGCAAGGCCTTGATGAAACATGCAACGGATGCCATGAAAGAGTCTCGCATCCCTGACTTTCTTGCCTCGCTAAATCCATTACAATATAGAAGAATGGATTTTGAAGAATTCTGTGCTGCTGCATTAAGTGTACATCAGCTCGAAGCTCTTGATCGCTGGGAACAACATGCCCGATGTGCTTACGAGCTCTTTGAGAAAGATGGAAACAGGGCTATCGTTATTGAAGAACTTGCATCGGAACTTGGGCTCGGTCCTTCTATCCCTGTTCACGTGGTTCTTCATGACTGGATACGGCACACCGATGGAAAGCTAAGCTTTCTTGGGTTTGTCAAATTATTGCATGGTGTGTCTAGCAGAAGTCTTGCAAAGGTTCAGTGA 1803 0.462 MGVCTSKPHKPNPYASREPEAEPYDPSQQIPKTPLTPSGGRKDDVIAGKQSPFFPFYSPSPAHFLKKSPATGGGNKSASSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKAATAIPEEGEEDGGGGAADLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARYKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHKNLVQYYDAFEDQDNVYIVMELCEGGELLDRILSKGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTSKDESSESELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSTEAKDFVKRLLNKDPRKRISASQALSHPWIRNYNNVKVPLDLLIFKLMKIYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENISKALMKHATDAMKESRIPDFLASLNPLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1814 600 Gene3D - 448 517 - -
Amo19g1814 600 PANTHER CDPK-RELATED KINASE 2 39 594 - -
Amo19g1814 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 594 - -
Amo19g1814 600 CDD STKc_CAMK 145 407 - -
Amo19g1814 600 SMART serkin_6 144 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1814 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Amo19g1814 600 SUPERFAMILY Protein kinase-like (PK-like) 140 447 IPR011009 -
Amo19g1814 600 Pfam Protein kinase domain 145 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1814 600 Gene3D Transferase(Phosphotransferase) domain 1 234 424 - -
Amo19g1814 600 ProSiteProfiles Protein kinase domain profile. 144 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1814 600 MobiDBLite consensus disorder prediction 1 128 - -
Amo19g1814 600 Gene3D - 426 587 - -
Amo19g1814 600 ProSitePatterns Protein kinases ATP-binding region signature. 150 176 IPR017441 GO:0005524
Amo19g1814 600 Gene3D Phosphorylase Kinase; domain 1 146 233 - -
Amo19g1814 600 SUPERFAMILY EF-hand 436 590 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1814 Amo-Chr19 53693451 53698659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1814 1 596 EF-hand Containing Proteins AT3G50530 72.598 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo19g1814 Pkinase 5.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1814 - K00924 gmx:100798913 1047.34