Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1799 ATGGGGTTCGAATTAGATGCTGTGGTTTCGAAATTGCAAAATCTTGCCACTTCTGATCATTCCTCTGTGGTGTCAATGAACATCTTTGTTGCACTTCTGTGTGCTTGTATTGTTATTGGCCATCTTCTTGAGGAAAATCGGTGGATGAATGAATCTATCACTGCCCTTTTGATTGGCGTTTGCACTGGTGTGTTCATTTTGCTGGTCAGTGGTGGTACACACTCGCATATTCTTGTCTTCAGTGAAGATCTTTTCTTCATATACCTTCTTCCACCTATAATATTCAATGCCGGGTTTCAAGTGAAAAAGAAGCAGTTCTTTGTTAACTTCATCACCATCATGATGTTTGGTGCAGTTGGTACATTAATATCGTGTACCATCATAACCTTCGGTGTTACACAAATTTTCAAGAGGATGGATATTGGTCCTATGGAAATAGGGGACTATCTAGCAATTGGTGCAATATTTGCCGCAACAGATTCTGTGTGCACATTGCAGGTGCTAAATCAAGATGAGACACCTTTATTGTACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCCACATCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTTGAGCAAATTGACCCGTCAATTGCTTTGCAATTTATTGGCAACTTCTTGTATCTGTTTCTCACAAGCACATTGCTTGGAGTTGGGGCAGGGCTGCTTAGTGCTTACATTATAAAGAAGCTGTATATTGGCAGACACTCTACAGATCGTGAGGTTGCTCTCATGATGCTCATGGCATACCTCTCCTACATGGTGGCCGAGTTGTGCTATCTGAGTGGCATTCTCACTGTATTCTTTTGCGGAATTGTTATGTCTCATTATACTTGGCATAATGTGACAGAGAGCTCAAGAGTCACCACCAAGCACGCATTTGCAACCATATCGTTTGTTGCTGAGATATTTCTCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGTTTTGTCAGTGATAGACCTGGAACATCAGTAGCAGTGAGTGCAGTATTGATGGGTCTAGTACTTGTTGGAAGAGCAGCTTTTGTTTTCCCGTTATCGTTCTTATCCAACTTGGCCAAAAAGTCATCAAGCGAGAAAATCACTTTCAGGCAGCAAGTGATTATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCATATAATCAGTTCACTATGTCCGGGCATACACAACAGCAATCCAATGCTATCATGATCACCAGCACCATCACAGTTGTGCTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAACCACTCATAATGCTTTTGCTGCCTCCAAACCCTCATAAAGGTACAAGCTCCACGAACAGCATATTGAGTCCAAAATCAGTTACTGTCCCACTTCTAGCCCAAGAATCTGAAGCTGATCTTGAAGGCCATGAAGTTACTCGCCCAAGCAGTATTCGCAACTTGCTAACCAGGCCAACACACACCGTCCACAGATTATGGCGTAAGTTCGACGATTCATTCATGCGCCCCGTTTTCGGCGGCAGGGGTTTTGTTCCTGTAGAGCCTGGTTCTCCAACTGAACGCAATGGCCATGGATGGCATTGA 1620 0.4327 MGFELDAVVSKLQNLATSDHSSVVSMNIFVALLCACIVIGHLLEENRWMNESITALLIGVCTGVFILLVSGGTHSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMMFGAVGTLISCTIITFGVTQIFKRMDIGPMEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLEQIDPSIALQFIGNFLYLFLTSTLLGVGAGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMVAELCYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATISFVAEIFLFLYVGMDALDIEKWSFVSDRPGTSVAVSAVLMGLVLVGRAAFVFPLSFLSNLAKKSSSEKITFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQQQSNAIMITSTITVVLFSTVVFGLMTKPLIMLLLPPNPHKGTSSTNSILSPKSVTVPLLAQESEADLEGHEVTRPSSIRNLLTRPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPTERNGHGWH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1799 539 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo19g1799 539 Gene3D - 145 197 - -
Amo19g1799 539 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 27 452 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo19g1799 539 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo19g1799 539 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo19g1799 539 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo19g1799 539 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo19g1799 539 PANTHER SODIUM/HYDROGEN EXCHANGER 7 537 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo19g1799 539 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1799 Amo-Chr19 52628577 52635149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1799 7 536 Antiporters AT3G05030 75.651 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1799 - - gmx:100816746 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1799 19 52628577 52635149 Amo09g1236 09 33847280 33853816 hybridization