Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1759 GATCCTTGTAAGAAAAGCCATGCCGATAAACGAAAGGGGATGCTATTGTATGGTGCTTTTAGTCTTAAACCTAGGAGGCTAGGATCAATGTTATCTTGGTCAACCTCTGCTAAAGATTTGAGGGAATTGGAGATGGAGAAAGAGAAAGAAGATGAGACATCTCCGAGGGGTGTCTTAGAAGCTGGCGTTAAAGACTTAGACTCTGAGTCAGAGCAACAAGCATCTGAATCAAATGCAAGTGGTTCAAGAAGAGGTGGTTTTGCTGAGGTTTATCAGGGTTGTCTTGAAGAAGGGAAACTAATAGCAGTGAAGAAATTGACGAATGGAAGCATAGAAGAAAAGACAGCGGGTTTTCTATCAGAACTTGGTGTGATTGCCCATGTTGATCATCCTAATACTGCCAAGATTATTGGATGCTGTGTCGAACGAGACATGCATCTTCTTGTCTTTTCACTTTCTCCTCTCGGAAGTTTGGGATCTCTTCTTCATGGTCCAAATAAACACAAACTAGATTGGAGTAAAAGATATAAGATTGCTTTGGGAATAGCTGATGGTTTACTCTATCTACATGAGAATTGTCACAGACGGATTATTCATAGAGATATTAAAGCAGAGAATATTTTGCTCACCGAGAATTTTGACCCACAGCTCCTGCAGCTTGCCGTTCTTCCATTGATGCTGATCCAAGATCAAACTCTAGTCACCCACGAACAACTTAATCCCTTCCATAAGTGA 735 0.4109 DPCKKSHADKRKGMLLYGAFSLKPRRLGSMLSWSTSAKDLRELEMEKEKEDETSPRGVLEAGVKDLDSESEQQASESNASGSRRGGFAEVYQGCLEEGKLIAVKKLTNGSIEEKTAGFLSELGVIAHVDHPNTAKIIGCCVERDMHLLVFSLSPLGSLGSLLHGPNKHKLDWSKRYKIALGIADGLLYLHENCHRRIIHRDIKAENILLTENFDPQLLQLAVLPLMLIQDQTLVTHEQLNPFHK* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1759 244 PANTHER OS08G0249100 PROTEIN 23 65 - -
Amo19g1759 244 PANTHER OS08G0249100 PROTEIN 78 222 - -
Amo19g1759 244 Pfam Protein tyrosine and serine/threonine kinase 84 212 IPR001245 GO:0004672|GO:0006468
Amo19g1759 244 MobiDBLite consensus disorder prediction 43 71 - -
Amo19g1759 244 PANTHER BNAA05G32020D PROTEIN 23 65 - -
Amo19g1759 244 PANTHER BNAA05G32020D PROTEIN 78 222 - -
Amo19g1759 244 MobiDBLite consensus disorder prediction 43 84 - -
Amo19g1759 244 SMART serkin_6 84 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1759 244 SUPERFAMILY Protein kinase-like (PK-like) 84 217 IPR011009 -
Amo19g1759 244 Gene3D Phosphorylase Kinase; domain 1 44 151 - -
Amo19g1759 244 Gene3D Transferase(Phosphotransferase) domain 1 154 235 - -
Amo19g1759 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Amo19g1759 244 ProSiteProfiles Protein kinase domain profile. 76 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1759 Amo-Chr19 49604151 49607449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1759 85 217 Receptor kinase-like Gene Family AT1G56120 48.872 2.48e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo19g1759 PK_Tyr_Ser-Thr 9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1759 - - aip:107615479 256.529