Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1735 ATGTGCGTTATGCAAGGTGTGTCAGGTTCGGAGTTTGCAAGGGTGATACAGCGCGTGGACAAGATGGAACACAACACAGAAGCCAAGAAATACATCTCTAATTCGAATAGGAAGAGGAAGCATAAAGTGCTGACATGTACGGGTTGTGAAGACATGCTTGCGGTGTACTTTGACTCCAAAACTGCAGCTTGGAAAGTTAAAAAATTAGTTGAGAAGCACAACCATGATCTTGTCCCCCAATGCTTGGTACACCTAATTCCAAACCACCGTGGGATGACTGAGGCTCAAAAAGCTCAGGCGAACACCATGCACGATAATGGTCTACAACCTCTAAAATAA 339 0.4454 MCVMQGVSGSEFARVIQRVDKMEHNTEAKKYISNSNRKRKHKVLTCTGCEDMLAVYFDSKTAAWKVKKLVEKHNHDLVPQCLVHLIPNHRGMTEAQKAQANTMHDNGLQPLK* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1735 112 Pfam FAR1 DNA-binding domain 33 79 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1735 Amo-Chr19 46714315 46714685 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g1735 FAR1 1.2e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1735 - - aip:107627763 152.14