Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1724 ATGGATGTTAATACTACTACTACTATCCCAAGTGTTGACACAAAGAGCCAGTCATACACACAGCACCAATTGCATTCAGAAAATCATGAGCATAGCCATGCTCATCTCCCCTCCAAAACCATTCTCATAGCCATTGCAGCGGCCACCACAGTTACCGTACTTCTCACCATTTTTTTTGTCCTATTCTTGCTCCGTCGACAAAAGTCTTCCAACAAGAATGGAGCCTGCAAGGATAAGAATCCAAGAGGGCTTCATGACACAAGCAGCAGACTCATTGCTTCAACAAAGTTGAGCATTAGTTCTAGTCCAGATGTGAAGGGAGGGTGTCTTCAAGGAGGAAACCTTAGTAGGTCACCAGCAGCACCTAAATTCAAAGGAGTACAAGTTTTCACATACAAGGAGATAGAAGTGGCCACAAATGGATTCAGTGAAGCAAATGTCATTGGTAATGGAGGGTTTGGTTTGATGTACAGAGGAGTCCTAAGTGATGGTACTTTGGCAGCAATCAAGTTGCTACGCAGAGAAGGTAAGCAAGGGGAGCGTGCCTTCAGAGTAGAGGTCGATCTCCTAAGTCGTTTGCACTCTCCTTACTTGGTGGAGTTACTTGGTTATTGTGCAGACCAAAACCATAGGCTACTCATATTTGAGTACCTACCCCATGGCACACTCCATCAACATCTACACTCCCCTAAGAACCAATCTCAGTCGTTGGATTGGTGGGCCAGGATGAGGATAGCCCTTGATTGTGCAAGGGCCCTGGAGTTCATGCATGAGCACCATGCAGTCTCACCCGTGATCCACAGAGACTTCAAGAGTAGCAATGTGTTATTAGATCAAAATTTCCGTGCTAAAGTGTCAGATTTTGGGTTGGCAAAGATGGGATCAGAGAAGATGAACGGTCAAGTTTCCACCCGTGTGTTGGGGACCACTGGATATCTGGCCCCAGAGTATGCCTCCACAGGAAAGCTTACCACAAAATCGGATGTTTACAGCTATGGTGTGGTTCTTCTTGAATTGCTTACAGGGCGTGTACCAGTTGATATTAAGCGGGCCCCTGGAGAACATGTCCTTGTCTCCTGGGCTCTTCCAAGATTAACAAACAGAGAAAAAGTGGTGGAAATGGTTGACCCGGATCTAAGGGGGCAATACTCAAAGAAGGATTTAATTCAGATAGCCGCCATTGCAGCAATGTGCATACAGCCAGAAGCAGATTATAGGCCACTCATGACGGATGTTGTACAATCACTAATACCACTTGCTAGGAACCCGGCTTCTCTTGGTTCATCAAGTTCTTTAAGGTTTCAGAAACAAACACCAAGCCCAAGTCCAAGTCACTAA 1338 0.4574 MDVNTTTTIPSVDTKSQSYTQHQLHSENHEHSHAHLPSKTILIAIAAATTVTVLLTIFFVLFLLRRQKSSNKNGACKDKNPRGLHDTSSRLIASTKLSISSSPDVKGGCLQGGNLSRSPAAPKFKGVQVFTYKEIEVATNGFSEANVIGNGGFGLMYRGVLSDGTLAAIKLLRREGKQGERAFRVEVDLLSRLHSPYLVELLGYCADQNHRLLIFEYLPHGTLHQHLHSPKNQSQSLDWWARMRIALDCARALEFMHEHHAVSPVIHRDFKSSNVLLDQNFRAKVSDFGLAKMGSEKMNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVVEMVDPDLRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLARNPASLGSSSSLRFQKQTPSPSPSH* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1724 445 MobiDBLite consensus disorder prediction 425 445 - -
Amo19g1724 445 ProSiteProfiles Protein kinase domain profile. 142 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1724 445 MobiDBLite consensus disorder prediction 1 32 - -
Amo19g1724 445 Gene3D Phosphorylase Kinase; domain 1 116 217 - -
Amo19g1724 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Amo19g1724 445 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 7 441 - -
Amo19g1724 445 CDD STKc_IRAK 148 419 - -
Amo19g1724 445 Pfam Protein tyrosine and serine/threonine kinase 146 416 IPR001245 GO:0004672|GO:0006468
Amo19g1724 445 SUPERFAMILY Protein kinase-like (PK-like) 126 414 IPR011009 -
Amo19g1724 445 PANTHER OS01G0750732 PROTEIN 7 441 - -
Amo19g1724 445 MobiDBLite consensus disorder prediction 1 23 - -
Amo19g1724 445 Gene3D Transferase(Phosphotransferase) domain 1 218 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1724 Amo-Chr19 46174483 46178169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1724 126 441 Receptor kinase-like Gene Family AT3G58690 64.815 9.44e-152 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Amo19g1724 PK_Tyr_Ser-Thr 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1724 - - gmx:100809810 672.544