Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1713 CAACATCATCCCACCTTCTCCTACGTGCCGCCTCAGGTCTCTACTGGACCTCCCTTCGCGCCTCCCGCCGCCCCCTCTTTCTGGCCGCTGTCTCCTCAGGCACCGCACTTCTCCCCGCTGCCAAATCCATCCGGAGGCGCTGCTCTGCCCAGCCTAGCCTGCCAGAATCCGTCGATTCCACCTCCTGGTGTTAGCTCTGCGGCTGCAATGGCTCCCGGCTCCCCCGACGTCTTCTCCTCCCTCGCTGCCCTCCGCTCCGGCCAGTACCGCATCGGATTCGGTACCATCCTCTCCGCCGGTACCTTCGTCTCTGCCCTCATTGTCGGATTCATCGCCATCTACGCCGCTCCGTTCTCCCTCGACCCCGTGCCATTCGTCAGAGACGTGCTCTTCTACTTGACGGCAGCGATGTTCCTCTTCTACGTGTATCTTGGCACGGAGATCTTCCTGTGGCAGGCAATTGGATTTGTAGGGTTTTATGCATTCTTCGTTGGTCTCGTGTTCTATATGGACTTGGGAGTAGTTGATGGCAGAGACAAGAGTGAGAATTCTTCCACAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACGTTGACTCTGACGCCAAGGTTTCGGGATCTATGAACGATGAGAAGCGCATATCTGGATTTCCGGGAGCTTATGGATTGGCGTTGGATTCGTTTGATTCTTTTTTGCAGTGTACATGGTACTGTGCACCTAGCGAATCGCCTTGCAAAACTGAGTCGCAACACGGCGTGATGAAGAGTTCAGATAAACCTCCGAAGGGGTCGAATTCAGGAACCCTAGCTGCTGAATCACCTGTTGTGAACAATCTTCTCCTTCCCTATCTAAGGTTTTTGAAACCAATGGCTTCCTCTCCTCATTTTGATGATCAAGACTTCGATTTTGAAGGTGGATTTTTCGGAACATGTTCTGGTGAGAAGAGGCCCTCTCCTGATTATGATGACGAATATTACGATAATGACCCTTTCGCACTCAAGAAGGCAAAATCAAAGGCTGAAGAAGCTGCTTCTGGTGTAACCACTGGAATGATATTGTCTCTTCGTGAGAGTCTTCAAAACTATAAGGATACCCTTGCCACATGCCAAGTACGTCTTACTTTTATGAATTCAATTACTCAAAGTTGA 1152 0.5113 QHHPTFSYVPPQVSTGPPFAPPAAPSFWPLSPQAPHFSPLPNPSGGAALPSLACQNPSIPPPGVSSAAAMAPGSPDVFSSLAALRSGQYRIGFGTILSAGTFVSALIVGFIAIYAAPFSLDPVPFVRDVLFYLTAAMFLFYVYLGTEIFLWQAIGFVGFYAFFVGLVFYMDLGVVDGRDKSENSSTDLEEQKELVAVHVDSDAKVSGSMNDEKRISGFPGAYGLALDSFDSFLQCTWYCAPSESPCKTESQHGVMKSSDKPPKGSNSGTLAAESPVVNNLLLPYLRFLKPMASSPHFDDQDFDFEGGFFGTCSGEKRPSPDYDDEYYDNDPFALKKAKSKAEEAASGVTTGMILSLRESLQNYKDTLATCQVRLTFMNSITQS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1713 383 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 69 202 - -
Amo19g1713 383 Pfam Sodium/calcium exchanger protein 69 167 IPR004837 GO:0016021|GO:0055085
Amo19g1713 383 Gene3D - 66 187 IPR044880 -
Amo19g1713 383 MobiDBLite consensus disorder prediction 244 271 - -
Amo19g1713 383 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 69 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1713 Amo-Chr19 45565483 45570086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1713 60 223 Antiporters AT1G08960 56.886 1.46e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1713 K13754 - gmx:100775437 205.682