Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1686 ATGTGTATTAGAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCTCAGCAAGTTCTCCGTCATGTCAATGTCTCTCTCCATGACGGAAGTGCGCTAGTCCTAACTGGTGCAAATGGCTCTGGCAAGACCACCTTCCTCCGCATGCTAGCTGGATTTTCCCGTCCCTCAGCCGGTGAAATTCTCTGGAATGGACACAACATACAAGATTCTGGAATCTTCCACCAGTACAAGCTCCAGCTCAACTGGCTCTCCCTCAAGGATGCAATCACTGATCGGTCCACGGTTCTCGAAAATGTTGAGTGGTTTGAGCTTCTTGAAGGAAAGTATGGCAGGGCTTTACCTGCGCTTGAGTTGATGGGGCTGGGCAGATTGGCCAAGGAGAAGCCAAGGATGCTATCCATGGGGCAGCGGAAAAGAGTGCAACTTGCAAGGTTGATTGCTCTCGATCGACCCATATGGTTGCTTGATGAGCCTTCCGTTGCGTTGGATGATGAAGGGGTGAAGTTACTTGAGTACATCATCTCGGAACATCGGAAAAATGGAGGGATTGTGATTGTGGCTACTCATTTACCTATTGAAATACATGATTCCATGTTGTTGCGGCTCCCACCCAGGTTTCCAAGGAGGATGACCTTCTTTGATATGCTTGATCGCTCCGATATTATGTAA 690 0.4826 MCIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQDSGIFHQYKLQLNWLSLKDAITDRSTVLENVEWFELLEGKYGRALPALELMGLGRLAKEKPRMLSMGQRKRVQLARLIALDRPIWLLDEPSVALDDEGVKLLEYIISEHRKNGGIVIVATHLPIEIHDSMLLRLPPRFPRRMTFFDMLDRSDIM* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1686 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
Amo19g1686 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Amo19g1686 229 Gene3D - 8 207 IPR027417 -
Amo19g1686 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 201 IPR027417 -
Amo19g1686 229 SMART AAA_5 35 223 IPR003593 -
Amo19g1686 229 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 208 IPR005895 GO:0017004|GO:0022857
Amo19g1686 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1686 Amo-Chr19 43227239 43233248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1686 24 197 Calmodulin-binding Proteins AT2G36910 24.742 3.08e-10 57.8