Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1670 ATGCAGAATCTACCTCCATTAGAGGCTCCTCTAAAATTGATAGAAAAAGTTCTAATGGCCAAAGATATAAAGTGGAAAGATGATGAGTTTAGCACTAGTTTCAGAGGTGATAATGAAAGAGGAGAAATCCCAATAGCAGAGACATTGAGACATCAAATTGAAATCCAAAAGAGACTAGAAGAACAGCTAGATATAAGAATAGAGGCTCAAGAAAAGTATTTGCAAGTTGTGTTAGAGAAAGCTCAGAGGACACTTTCCATGGAAGGTTCAGGCAGTTTCCATAATTACCATGAAGTAATAAGGGGAGAAGAAAATATTGATCAAAAGCCTAAGATTAAAGAGGGTTCAATTCAGTTTGACTTAGACAGCAGATGTACCTATGATCTTGTATCTGCAAGTGGATGTGGATCTGAAATTGAAGCCAAAATGCTTTCATATAGGCTATGA 447 0.3647 MQNLPPLEAPLKLIEKVLMAKDIKWKDDEFSTSFRGDNERGEIPIAETLRHQIEIQKRLEEQLDIRIEAQEKYLQVVLEKAQRTLSMEGSGSFHNYHEVIRGEENIDQKPKIKEGSIQFDLDSRCTYDLVSASGCGSEIEAKMLSYRL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1670 148 Pfam MYB-CC type transfactor, LHEQLE motif 44 84 IPR025756 -
Amo19g1670 148 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 38 91 IPR044848 GO:0003700
Amo19g1670 148 PANTHER MYB-RELATED PROTEIN 2 38 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1670 Amo-Chr19 42948840 42949879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1670 31 148 G2-like Transcription Factor Family AT5G45580 27.811 1.63e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1670 - - adu:107487134 177.563