Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1665 ATGCTCGCATCTGCTCGCTTGTTGCCGGCAGTTGCTGCCTCCCCTCTGCTTCTGTGTGCCTCCTCTGTCTCTGCCTCTCTGCTACTGTCATTCTTTGACTCCGCCTCATGTTTCTTTTCTGTTGTCAAAGCTAAAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCTCAGCATGTTCTCCGTCATGTCAATGTCTCTCTCCATAACGGAAGTGCGCTAGTCCTAACTGGTGCAAATGGCTCTGGCAAGACCACCTTCCTCTGCATGTTAGCTGGATTTTCCCGTCCCTCAGCCGGTGAAATTCTTTGGAATGGACACAACATACAAGATTCTGGAATCTTCCACCAGTACAAGCTCAAGCTCAACTGGCTCTCCCTCAAGGATGCGATCACTGATCGGTTCACGGTTCTCGAAAATGTTCAGTGGTTTGAGCTTCTTGAAGGAAAGTATGGCAAGGCTTTACCTGCGCTTGAATTGGCCAAGGAGAAACCAAAGATGCTATCCATGGGGCAGCGGAAAAGAGTGCAACTTGCAATGTTGATTGTCGATCGACCCATATGGTTGCTTGATGAGCCTTCCGTTGCGTTGGATGATGAAGGGGTGAAGTTACTTGAGTACATCATCTCGGAACATCGGAAGAATGGAGGGATTGTGATTGTGGCTACTCATTTACCTATTGAAATACATGATTCCATGTTGTTGCGGCTCCCACCCAGGTTTCCAAGGAGGATGACTTTCTTTGATATGCTTGATCGTTCCTATATTATGATTTCCGTTGATTACACTCCACTACCAAACTTTTACTCTGGACCTGGTTTTGACACTGAAGTACTACGATCACTCAGGATTATCTGA 876 0.468 MLASARLLPAVAASPLLLCASSVSASLLLSFFDSASCFFSVVKAKKPPFPRLLLNNVSCMRNAQHVLRHVNVSLHNGSALVLTGANGSGKTTFLCMLAGFSRPSAGEILWNGHNIQDSGIFHQYKLKLNWLSLKDAITDRFTVLENVQWFELLEGKYGKALPALELAKEKPKMLSMGQRKRVQLAMLIVDRPIWLLDEPSVALDDEGVKLLEYIISEHRKNGGIVIVATHLPIEIHDSMLLRLPPRFPRRMTFFDMLDRSYIMISVDYTPLPNFYSGPGFDTEVLRSLRII* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1665 291 Gene3D - 42 241 IPR027417 -
Amo19g1665 291 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 269 IPR003439 GO:0005524
Amo19g1665 291 SMART AAA_5 76 257 IPR003593 -
Amo19g1665 291 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 54 242 IPR005895 GO:0017004|GO:0022857
Amo19g1665 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 232 IPR027417 -
Amo19g1665 291 Pfam ABC transporter 67 200 IPR003439 GO:0005524
Amo19g1665 291 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 50 257 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1665 Amo-Chr19 42816870 42819143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1665 65 231 Calmodulin-binding Proteins AT2G36910 24.211 1.42e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1665 - - lja:Lj0g3v0105229.1 356.681