Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1664 ATGAAGGATTTATCAGTCCTAGTCATTGACCAGGGTATGATTGTTGATAGAATAGACTACAACATTCAGAATGTAGCCACTATAGTTGAAGATGGCCTTAAACAGCTTCAGAAGGTCCTACATCTCTTCCTTTCCCATGGCAGAGAGAAACCAGAAAAAGGGGGCATGGTGATGTGTGCGACGGTGCTGCTCATCATGTGCCTTGTTATTAATGCAGCTTGTCTTAAGAGAGGACCAAGGAGTTTCAAAGTAGCTAAGGCACGTGTTTTGGATGAAGAGATCTGA 285 0.4316 MKDLSVLVIDQGMIVDRIDYNIQNVATIVEDGLKQLQKVLHLFLSHGREKPEKGGMVMCATVLLIMCLVINAACLKRGPRSFKVAKARVLDEEI* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1664 94 CDD SNARE_syntaxin16 1 38 - -
Amo19g1664 94 Gene3D - 1 75 - -
Amo19g1664 94 PANTHER SYNTAXIN 1 70 IPR045242 -
Amo19g1664 94 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 70 - -
Amo19g1664 94 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 1 39 IPR000727 -
Amo19g1664 94 SUPERFAMILY SNARE fusion complex 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1664 Amo-Chr19 42815502 42816068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1664 1 70 SNARE and Associated Proteins AT5G26980 63.380 2.48e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1664 K08489 - gmx:100796741 96.2857