Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1663 GAGCTTAATGAATATTTTTTCTTTGATTCATCACCAATTCACGCTACCTGCACAAACTCGTGCGCCTTCTCCTTCGATTTGTCACCGCTGCTCATCTCTTCTTCAAGGGTTTTCACCTTCGATTCGTGGTCACTCATCTCTTCTTCACCGTTGCCATTCATCACCGCGCTCACCAATGTCAAAGAAACTGTGTGCTCTCTAGCGACCTCTTCTCCGCTCTACTGTGAAGCATCAAGGTTTCCAATGAGGCAAAGCATCGATCCCTTACAATCGAGTCGTGCAATTGAGTTGAAGAATCATTCATTACTACATGGAAAAGTGATAAGGGTCATGTGGTCTCGTCGCGATCCTGATGTGAGAAAAAGTGGCAGAGGAAATGTTTTTGTTAAGAACTTAGCTGAATCCATAGATAATGCAGGATTACATTGCGATTTATTTCTAAATTTGGAAATATCTTTGTCCAGCTTTGGAAATTGCTTTTTTGGTGCTTCAAATTGGTTTAGAGGGAGTGATGATAGTGATACTGCTGAGAAGCCACGGGAACGAGAATTTGTTGAAAGGCTAAAAGCCAAGTTTCATGATTGA 585 0.4188 ELNEYFFFDSSPIHATCTNSCAFSFDLSPLLISSSRVFTFDSWSLISSSPLPFITALTNVKETVCSLATSSPLYCEASRFPMRQSIDPLQSSRAIELKNHSLLHGKVIRVMWSRRDPDVRKSGRGNVFVKNLAESIDNAGLHCDLFLNLEISLSSFGNCFFGASNWFRGSDDSDTAEKPREREFVERLKAKFHD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1663 194 SUPERFAMILY RNA-binding domain, RBD 91 141 IPR035979 GO:0003676
Amo19g1663 194 PANTHER RNA BINDING PROTEIN 86 149 - -
Amo19g1663 194 PANTHER POLYADENYLATE-BINDING PROTEIN 86 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1663 Amo-Chr19 42703403 42705596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1663 87 158 Eukaryotic Initiation Factors Gene Family AT4G34110 54.167 1.30e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1663 K13126 - aip:110263767 172.17