Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1662 ATGAAGAGCTTCATGACTTATGAAAGCAATGTACTTTTTGCCCTTCGCTTCATGATTGATTGCAATATAGCTGGTGGTAATTGGATTGAAATTCCTGCTGGAAAATATAAGAAGACAGCAAGAAGCTTGTCTAACTATGGTGAAACTTATGCTGTACTTACTGAACAGGCAAGGGTTCCTCCTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTCGTTGGCACTGCAGTTGAAGAGGAGACTGGCATAAAGTTCAAACTTGAAGACATGGTTGATCTCACTGCTTTCTTGGATTCTTCAACATGA 330 0.4 MKSFMTYESNVLFALRFMIDCNIAGGNWIEIPAGKYKKTARSLSNYGETYAVLTEQARVPPGRIILELPAGMLDDDKGDFVGTAVEEETGIKFKLEDMVDLTAFLDSST* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1662 109 SUPERFAMILY Nudix 51 94 IPR015797 -
Amo19g1662 109 Pfam DNA polymerase family B, exonuclease domain 4 35 IPR006133 -
Amo19g1662 109 Gene3D DNA Polymerase, chain B, domain 1 1 42 - -
Amo19g1662 109 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 45 105 - -
Amo19g1662 109 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 45 105 - -
Amo19g1662 109 SUPERFAMILY Ribonuclease H-like 6 46 IPR012337 -
Amo19g1662 109 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 43 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1662 1 44 Core DNA Replication Machinery Family AT5G63960 77.273 9.81e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1662 K18447 - gmx:100818255 108.997