Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1656 ATGGATGTTGTTTTCATCAAGAAAAGGTTCATTATGATTGCCTTATTGTGTATTGGCAAGGTACCGTTCTATGTGACTACATGTCCAAAAGCCGAGTCCATTGTCAAGTCCATGGTTCAATCCCATCTTAACTCCGACCCTGCTCTAGCTGCTGGCTTACTCAGTATGCACTTCCATGATTGCTTTGTCCAAGGTTGTGACGCTTCTGTCCTCGTTACCGGCTCTGCCACCGAGAAAACAGCATTTGCAAACCTCGGACTTAGAAGATTCGAGGTCATTGATGACCCAAAGACACAACTCGAGGCTGCATGTCCTGGCGTTGTGTCTTGCGCCGATATTGTTGCCCTTGCTGCTCGCGACTCCGTCCTCCTGAGCGGTGGATTGAGTTGGCAAGTGCCTACCGGACGTAAAGATGGTCGTGTGTCACAAGTTTCGGATGTTAACAACTTGCCTGCACCTACGGACTCTGTTGATGTTCAAAAACAGAAGTTTGCAGCAAAGGGCCTCAACACAAAGACCTCATTACCTTTTATGTGGACAGGAGGACATATGATAAGTATCGCAGCATGCCAATTCTTCAGCAACAGATTGTACAACTTCATCGGAAATGGACTTGATCCTTCCATTAACCCTTCATTTGTTCCGCAACTACAAGCACTCTGCCCTCAAAACAGTGGAGGTAGCAACCGTGTTTCCTTAGATACCGGAAGCCAACTGAAATTTGATACTTCTTACTATGCTAATTTGAGGAATGGACGTGGAATTCTTGAGTCAGATGAGGCACTATGGAATGATGCTTCCACGAAGATGTTTGTGCAGAGATACTTAAGCCTAAGAGAGATGCTTGGCTTTTCTTTCAGCCTTGAGTTTGGAAATTCTATGGTTAAGATGGGCAACATTGGAATCAAGACTGGTGCTGATGGTGAAATTCGCAATATTTGCATTGTTCTGCTTTTAACTGACTACTTCAATCAAATAAATGTGTAG 987 0.4458 MDVVFIKKRFIMIALLCIGKVPFYVTTCPKAESIVKSMVQSHLNSDPALAAGLLSMHFHDCFVQGCDASVLVTGSATEKTAFANLGLRRFEVIDDPKTQLEAACPGVVSCADIVALAARDSVLLSGGLSWQVPTGRKDGRVSQVSDVNNLPAPTDSVDVQKQKFAAKGLNTKTSLPFMWTGGHMISIAACQFFSNRLYNFIGNGLDPSINPSFVPQLQALCPQNSGGSNRVSLDTGSQLKFDTSYYANLRNGRGILESDEALWNDASTKMFVQRYLSLREMLGFSFSLEFGNSMVKMGNIGIKTGADGEIRNICIVLLLTDYFNQINV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1656 328 CDD secretory_peroxidase 23 314 IPR033905 GO:0004601|GO:0042744
Amo19g1656 328 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PANTHER PEROXIDASE 12 315 - -
Amo19g1656 328 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 Pfam Peroxidase 35 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Plant peroxidase signature 88 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 Gene3D Peroxidase, domain 2 151 297 - -
Amo19g1656 328 PANTHER PEROXIDASE 25-RELATED 12 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1656 328 Gene3D - 22 315 - -
Amo19g1656 328 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1656 Amo-Chr19 42163427 42164897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1656 20 314 Peroxidase AT5G64120 58.305 1.42e-127 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1656 K00430 - gmx:100820620 441.425