Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1645 ATGCCTTCACCTCCCTCATCCTTCGCAACCATTTCTCGTAACCGCACTGTCTTCTCTAGAAAATGGACCAACAAGGAATACGCAATCGCATTCACAAGCTTCTCCTTCACACTCATCCTCTTCTCCCTCACTCGCCGCCCCAACCTCCAAGAACCTTCTAGAATCTCTTCTTCCAATCACCTTGTTCCCTTGACCCTCCTCTCGAATGCCACCCAAAGAGGCGCACTTTGCTTGGATGGGAGTGCCCCTGGGTACCACTTTCAGAAGGGATTCGGGTCCGGATATCAAAATTGGCTACTTCACATTGAGGGAGGTGGGTGGTGTGAGTCGGTAGCTTCGTGTTATCAGCGAAAAATGACTGCGTTGGGTTCGTCCAAGCACATGGAAACAGAGGTTCCTTTCTCTGGAATATTAAGCTCTGACCCTTCTCAAAATCCTTATTTCTTTAACTGGAACAAGGTGAGGATACGCTATTGTGATGGTGCATCTTTTGCTGGCCACCAAGAAAGTGAGATTAAGGATGGAAATGGCTTGTTCTTCAGAGGCCAGATCATTTGGGAAGCTATTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGCACTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTAATACATTGTGATGACTTCCGAAAATATTTTTCGAAAGACATAAATGTTAAATGTCTTGCTGATGCTGGGTTTTTCCTAGACGAGGAGGATGCTATTCGAAATAGGACAATGAGATCTTTCTATCATGACGTTGTTCAGCTTCAGGGTGTTGCAAAAAGTTTACACAAAGATTGCATTGCTAGAATTGAACCATTTAAGTGTCTTTTTCCATTAGAAATTGTTAAGAACATAAAGACTCCAGTTTTTTTTGTCCACCCTGCTTATGATTTTTGGCAGATACAAAATATTTTGGTACCTCATGGTTCAGACCCCCATGGTTACTGGAAAAGCTGCAGATTGAACATTCCCAATTGCAATGCTGATCAGTTTGATGTACTTCATGGTTTCCGTAAATCATTGCTGAAGAGACTCAACGAGTTCCAGCAACGAAAGGAGATTGGAATGTTCATAAATTCCTGCTTTATTCATTGCCAGACAGCGATGGGAGAGACATGGCACTCCCACAATTCCCCTAAAATAAATGATAAGACAATTGCTGAAACTGTCGCTGATTGGTACTTTGACCGCAAAGTTCTCAAGCTAATTGACTGCCCTTATCCGTGCAATCCCACTTGCCGCAATATGGATTTCACCAGAAAATAA 1293 0.4323 MPSPPSSFATISRNRTVFSRKWTNKEYAIAFTSFSFTLILFSLTRRPNLQEPSRISSSNHLVPLTLLSNATQRGALCLDGSAPGYHFQKGFGSGYQNWLLHIEGGGWCESVASCYQRKMTALGSSKHMETEVPFSGILSSDPSQNPYFFNWNKVRIRYCDGASFAGHQESEIKDGNGLFFRGQIIWEAIMDELLSIGMSKAKQALLSGCSAGGLATLIHCDDFRKYFSKDINVKCLADAGFFLDEEDAIRNRTMRSFYHDVVQLQGVAKSLHKDCIARIEPFKCLFPLEIVKNIKTPVFFVHPAYDFWQIQNILVPHGSDPHGYWKSCRLNIPNCNADQFDVLHGFRKSLLKRLNEFQQRKEIGMFINSCFIHCQTAMGETWHSHNSPKINDKTIAETVADWYFDRKVLKLIDCPYPCNPTCRNMDFTRK* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1645 430 PANTHER NOTUM-RELATED 23 422 IPR004963 GO:0016787
Amo19g1645 430 SUPERFAMILY alpha/beta-Hydrolases 185 316 IPR029058 -
Amo19g1645 430 Pfam Pectinacetylesterase 57 407 IPR004963 GO:0016787
Amo19g1645 430 PANTHER PECTIN ACETYLESTERASE 4 23 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1645 Amo-Chr19 41653573 41664037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1645 20 394 Carbohydrate Esterase AT3G09410 59.269 6.65e-170 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1645 K19882 - gmx:100792819 617.846