Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1586 ATGACTTCCTCCACCACCAGAAACCAATATAGGGTTAATCCCTACAGAACAAGGATGTATGATGTGTTCATCAGTGTCAGTCGCCAACACCCTCATCGTCAACACTTCGCTTCACGCCTCTGTGGCGCTCTCATAGATGCTGGGGTACATGTTTGTGACGAGATACTTCTTAGAACAGGAGACTTTGTCTTTTCCCAGAGTGTGGGTGTACCGGCCGGAATCGAAGGTTCCAGAGTTTCTGTCATCATCTTCACAAAAGAATACTTGGATTCAGCATGGTGTTTCCAAGAGCTACTGAAAATTATGGAGTGTCGAAGTAGCAAGGCTCAGGTGGTTGTTCCAGTGTTCTGCGGTGTAGATCCGTCAGAAGTAAGGGATTATTCTGGTCACTTTGGAAGAGTTATGACTTCTCTTGATGGAAAATCAACACCGCGGCCGTGCCATGTTACCACGCTTCAAGAAGCCGCTGACATTTCACCAAGTTTTGTGACAGTTTCCGGGAAGGAAATGGAATCTATCAAGAGTATTGTTGAACATGTTGCTTTTTTAATAGATTCAAGAGACCTATTTGTTGCACAGCATCCTGTGGGAATTAAATCTCGTGTGCAAGATTTAATTCAAATATTAAACATTCATGAGAAACCAAATGATGTTCTTGTACTAGGGATTTGGGGAATGGGAGGAGCTGGTAAGACAACAATTGCCAAAGCTCTCTACAATAAAATTCGTCGTAAGTTTGAAGTGAGAAAATTCATCCCAGATATTAGCGATAGAATGGAGCAAAATGAAATGGATTCTTTGGCATCTTTACGAGATGAGATTCTTCATTGCATGAACCGAAAGAAAGCACTTCTTATACTTGACAATGTGGGAAGCAACAAAGAATTAGAGAATTTGCTTGTAAGTCATACATTGTTTGGTCCTGGTAGCATAATAATCATCACAACTAGGAATAAGCAACCACTTTATCTGGTTAGAGTTGACCATATATATAGAGTGAAAGAAATGGACTACAACGAATGCGTTGAGCTTTTTAGTTGGTGTGCATTCAAGAAAGCAACTCCTAGAAGAACATTTGCTGGGCTTATTAAGGAAGTAGTTGAATATTCTGATGGATTGCCATTGGCTATTGTAGCTTTTGGCTGTGTTTTAAGTGGAAGAAATATAGCAGAGTGGGGGATTGTATTGGATAGGGTCAAGATATTTCCCATTCAAGATGTCCAAGAGGTGTTAAAAATAAGCATTAATCGTTTGGATCACAAAGAGAAACAAGTATTTCTTGAGATAGCTTATTTCAGTCATGCGTTTAGTGGAATGTCGCGAAAAGATGCAATGCAGATATTAAATGGGTCTGAAGGAATTTTGGGGCTTGAACGCCAGAGTCTAGTGACGTTTGAGGAGAACAAGCTTCGCATGCATCCGTTGCTACAAGAGATAGGAAGAGAAATCTATCAGAAGGAATCATCTTCATTTAATCCTCAGCGAAAGGTATATGATGTATTCTTGAGCTTTCGTGGTACAGACACTCGTTCCACGTTCACCTCACATCTTCACGCATCTCTTGAAAATGCTGGCATTTATGTTTTTAAGGATGATGATGGACTTCTAAGAGGAGAGCAGGTCTCAATCTCACTTCTAAAAGCAATTGAAGAGTCTAAAATTTCAATCATTATTTTGTCACCAAATTACCCCAATTCAAAATGGTGTTTGAAAGAGCTGGAGACCATTATGCTGTATCATAAAAAACAAAGCTCAAAAGTGCGCAATCAAACAGGAGAGTTTGGACGAGCTTTTAAAGTTCTAATAGAAAGAATCCAAAAGAATAGAGACAATGAGCAGAGTTGGAGAGCAGCACTCAAACAAGTTGGTTGCATCTCAGGGTTTGTCATTCAACAATCAAGAAACGAAAGTGAGGCTATTAAGAACATAATTGAACAAGTCACTCGGATGCTAGACATGAAGGACCTGTTTGTTGCTAACCATCCAGTAGGAGTAGAACTTCGGGTTGAAGAGGTGATTAAAATGTTGAGGAATCAAAACACAAAAGATCCTCTATTATTAGGGATATGGGGCATGGGAGGGATCGGTAAAACAACTATTGCCAAAGCAGTTTATAACAAAATTTGTCGTGAATTCGAGGGTCGATGCTTCCTCTTAAATATCAGGGAAGTTTGGGATCAAGATAATGGCGGAGTTCATTTACAGGAACAACTTCTCTCCAGTATATACCAAACAATGAAACTAAAGATACAAAACGTGGAATCTGGAAAAGTGATATTAGAGGAAAGACTTGGCCAAAAGAAGATACTTGTTGTACTTGATGACGTGGACAAATTGGAGCAACTAAATGCTTTGGCTGCAAATCGTAAATGGTTCTGCCCAGGGAGTGTAATAATCATCACAACAAGGGATCAACGTCTTCTTAATTGGCTTCGAGTTGACAAGGTATATAGGCTGGAAAAGTTGAGTGACAGAGAATCTGTCGAACTTTTTAGTTGGCATGCATTTAAGGAACCATTTCCTATTGAAGAATTTGTCGGGTTTACAAGTAAAGTGGTCTCCTACTGTGGGAGATTACCGTTAGCACTTGAGGTTCTTGGATCACATTTGTTTAAAAGGGGAATACAAGAGTGGATAAGTGTTTTGGAGAAACTCAAAAACATTCCCAATGAGCAAATACAAAAGAAGCTGAAAATAAGCTTTGATGGTTTAAACGATGACGAAGATCGGGAAATATTCCTTGATATAGCTTTTTTCTTTATCGGAATGGACAAAGACGAAGTAATTGATATATTGAATGGCTGTGGATATTCTACTGAAATTGGGATCAGTGTTCTCAGGGAACGATCTCTTGTAACAATTGACTCTAAGAACAAACTTAGAATGCATTATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGAGAATCTACCTTTACCCGAAGAACGCAGTAGATTATGGAATCCAGAAGAAGTGCTTGATGTCTTATCAAAAGACATGGGAACAAAAGCTATTCAGGGACTTGCTTTGAAGTTGTCAAGGATGAAACCAATTCATTTGAAGACCAATGCTTTTAGGAAGATGAAGAGACTAAGATTGCTTCAACTTGGTGGTGTACAACTCGATGGAGACTTTAAATACCTCTCAACCGATCTTCGATGGTTGTCCTGGCATGGATGTTCTTCAGAATATACAACTATAGGTTTTGATCAGGGAAATTTAGTTGCCATTGACTTCAAATATAGCAATCTCCAGCTAGTATGGAAGAAGAGGCAGATGCTAATGAAGTTGGAAATTCTCAATCTTAGTCATTCTCAATATTTGACAGAAACTCCTGACTTTTCAAACATTCCTAATCTTAAAAAGTTAATACTCAAATATTGTTCAAGGCTATCTTTGGTTTCCCATACCATTGGAGATCTTAAAAAAATTCTTCTAGTCAATCTGAAAGGTTGCACAAGCCTTCGTATACTTCCAAGAAGCATCTACAAGTTGAAATTTCTGAAAACTCTCATTCTTTCTGGATGTTCAGAAATTAACAAGTTGGAAGAGGATTTAGAACAGATGGAATCTTTGACAACTTTGATGGCCAATAAAACTGCTATAACACAAGTGCCAAATGCATTGATAAGATTGAAAAGCATTGTATATGTTTCTTTCTTCCATGGTACATCATCCATTATCGGAGAGCTCCCAAATATTCAGGGTATCAGGTTAGAAAGCGGTTCACAAATACAAACAACCGGAGATTTTACCTTGGATGCCATCAATATAAAAAATTGTAAGGAACTGGAAGCACCACCAGCCATATCACATGTTTTAAAAATGGATACCTCAGCCTTAGTTGATTGTCGCAGTCAAGGTGACATGTCTATATCAAAAGCTACCATCAGTTTCATTTTAATTCAAATGGTAACGAACTGTCCGGTCACAAAAATACTCAGAGAAAGCATTTCACAGAAACTGGCTGCCAGTACCAGTGATGTGGGAGAATGTTTGCTCCCTGGTGACAACAATACTGATTGGTTAAGTTTCAATGGTGAAGGTTCTTCTGTGATTTTCGAAGTCCCTAAAGTGAAAGGGCATAATTTGAAGGCAGTGACATTGTGCATTGTTTATTCCTCCCCAGATATCATGACATATGAAGGCCTAATTCTTAAAAATCTGTTGATCATTAATCACACAAAGACCACTCCTTATCTATATGAGGGAGATACCTTGCTTTCACTTAGAGATGAAGATTGGCAGAATGTCATATCAAATCTTGAAGCTGGTGACAAAGTTCAGGAGGTTGTTGTTTTGGGGGATGGAATCGTTGCGAAGAACACTGCAGTTTACCTCATTCATGATGAGTCGATCGACCAAAACATTGATGAATGCCAAGAAGATGTCATTGTGAATAGCATGGTTGTTGGTAAGAAAGAAGATGCTTCTAATGTTGATGATATGAGAGATAAGAATTTCAGTGTCCCTGCTGTTGATGCTACACCTGCAATCAGTAATAAGATTCCTGTTTCCGGCACAGATAAAAAAGTTGACATTGGCATCATGAAAAAGGCTGGTGAATGGATGTAA 4578 0.3873 MTSSTTRNQYRVNPYRTRMYDVFISVSRQHPHRQHFASRLCGALIDAGVHVCDEILLRTGDFVFSQSVGVPAGIEGSRVSVIIFTKEYLDSAWCFQELLKIMECRSSKAQVVVPVFCGVDPSEVRDYSGHFGRVMTSLDGKSTPRPCHVTTLQEAADISPSFVTVSGKEMESIKSIVEHVAFLIDSRDLFVAQHPVGIKSRVQDLIQILNIHEKPNDVLVLGIWGMGGAGKTTIAKALYNKIRRKFEVRKFIPDISDRMEQNEMDSLASLRDEILHCMNRKKALLILDNVGSNKELENLLVSHTLFGPGSIIIITTRNKQPLYLVRVDHIYRVKEMDYNECVELFSWCAFKKATPRRTFAGLIKEVVEYSDGLPLAIVAFGCVLSGRNIAEWGIVLDRVKIFPIQDVQEVLKISINRLDHKEKQVFLEIAYFSHAFSGMSRKDAMQILNGSEGILGLERQSLVTFEENKLRMHPLLQEIGREIYQKESSSFNPQRKVYDVFLSFRGTDTRSTFTSHLHASLENAGIYVFKDDDGLLRGEQVSISLLKAIEESKISIIILSPNYPNSKWCLKELETIMLYHKKQSSKVRNQTGEFGRAFKVLIERIQKNRDNEQSWRAALKQVGCISGFVIQQSRNESEAIKNIIEQVTRMLDMKDLFVANHPVGVELRVEEVIKMLRNQNTKDPLLLGIWGMGGIGKTTIAKAVYNKICREFEGRCFLLNIREVWDQDNGGVHLQEQLLSSIYQTMKLKIQNVESGKVILEERLGQKKILVVLDDVDKLEQLNALAANRKWFCPGSVIIITTRDQRLLNWLRVDKVYRLEKLSDRESVELFSWHAFKEPFPIEEFVGFTSKVVSYCGRLPLALEVLGSHLFKRGIQEWISVLEKLKNIPNEQIQKKLKISFDGLNDDEDREIFLDIAFFFIGMDKDEVIDILNGCGYSTEIGISVLRERSLVTIDSKNKLRMHYLLRDMGREIIRENLPLPEERSRLWNPEEVLDVLSKDMGTKAIQGLALKLSRMKPIHLKTNAFRKMKRLRLLQLGGVQLDGDFKYLSTDLRWLSWHGCSSEYTTIGFDQGNLVAIDFKYSNLQLVWKKRQMLMKLEILNLSHSQYLTETPDFSNIPNLKKLILKYCSRLSLVSHTIGDLKKILLVNLKGCTSLRILPRSIYKLKFLKTLILSGCSEINKLEEDLEQMESLTTLMANKTAITQVPNALIRLKSIVYVSFFHGTSSIIGELPNIQGIRLESGSQIQTTGDFTLDAINIKNCKELEAPPAISHVLKMDTSALVDCRSQGDMSISKATISFILIQMVTNCPVTKILRESISQKLAASTSDVGECLLPGDNNTDWLSFNGEGSSVIFEVPKVKGHNLKAVTLCIVYSSPDIMTYEGLILKNLLIINHTKTTPYLYEGDTLLSLRDEDWQNVISNLEAGDKVQEVVVLGDGIVAKNTAVYLIHDESIDQNIDECQEDVIVNSMVVGKKEDASNVDDMRDKNFSVPAVDATPAISNKIPVSGTDKKVDIGIMKKAGEWM* 1526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1586 1525 Pfam TIR domain 20 142 IPR000157 GO:0007165
Amo19g1586 1525 Pfam TIR domain 498 650 IPR000157 GO:0007165
Amo19g1586 1525 Gene3D - 336 419 IPR042197 -
Amo19g1586 1525 Gene3D - 821 905 IPR042197 -
Amo19g1586 1525 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 137 IPR035897 -
Amo19g1586 1525 ProSiteProfiles TIR domain profile. 18 156 IPR000157 GO:0007165
Amo19g1586 1525 SUPERFAMILY Toll/Interleukin receptor TIR domain 488 627 IPR035897 -
Amo19g1586 1525 Gene3D - 14 184 IPR035897 -
Amo19g1586 1525 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 506 1448 IPR044974 GO:0006952
Amo19g1586 1525 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 486 IPR044974 GO:0006952
Amo19g1586 1525 Gene3D - 649 815 IPR027417 -
Amo19g1586 1525 Gene3D - 188 328 IPR027417 -
Amo19g1586 1525 SMART AAA_5 217 337 IPR003593 -
Amo19g1586 1525 SMART AAA_5 683 823 IPR003593 -
Amo19g1586 1525 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 506 1448 - -
Amo19g1586 1525 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 30 486 - -
Amo19g1586 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 916 IPR027417 -
Amo19g1586 1525 Gene3D - 495 648 IPR035897 -
Amo19g1586 1525 PRINTS Disease resistance protein signature 686 701 - -
Amo19g1586 1525 PRINTS Disease resistance protein signature 763 777 - -
Amo19g1586 1525 PRINTS Disease resistance protein signature 856 870 - -
Amo19g1586 1525 PRINTS Disease resistance protein signature 1164 1180 - -
Amo19g1586 1525 SMART till_3 497 625 IPR000157 GO:0007165
Amo19g1586 1525 SMART till_3 19 173 IPR000157 GO:0007165
Amo19g1586 1525 CDD AAA 196 332 - -
Amo19g1586 1525 Gene3D Ribonuclease Inhibitor 994 1333 IPR032675 -
Amo19g1586 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 427 IPR027417 -
Amo19g1586 1525 Pfam NB-ARC domain 202 407 IPR002182 GO:0043531
Amo19g1586 1525 Pfam NB-ARC domain 668 896 IPR002182 GO:0043531
Amo19g1586 1525 ProSiteProfiles TIR domain profile. 496 651 IPR000157 GO:0007165
Amo19g1586 1525 SUPERFAMILY "Winged helix" DNA-binding domain 892 997 IPR036390 -
Amo19g1586 1525 SUPERFAMILY L domain-like 1010 1240 - -
Amo19g1586 1525 Coils Coil 1180 1200 - -
Amo19g1586 1525 CDD AAA 663 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1586 Amo-Chr19 37917749 37935240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1586 13 489 WRKY Transcription Factor Family AT4G12020 26.087 1.19e-33 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1586 - - ahf:112749517 1687.16