Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1584 ATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAATTGGGTCACATCTATTTAATAGGAAAGTATATGAATGGAGGAATGTTTTGAATAAATTCAAAGCTATTCCAAACAACGATGTACAGAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGGATAGAGAAATATTTCTTGATGTAGCATTTTTCTTTATTGGAATGGACAAAAATGATGTGATTGATATATTAAATGGCTACGGGCATTCAGCTGAAATTGGAATAAATGTTCTTATGGAACGATGCCTTATTACTGTGGACACTAAGGGAAAACTTGGCATGCATGGTTTGCTGCGAGACATGGGAAAAGAAATTATTCGCGAGAGTTTGCCAATGAAACCTGAGAAACGTAGTAGGTTGTGGAATCCAGAGGAAGTGCTTAATGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTGCCAAAGTCATTGAATCCAACTCAATTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTGAGATTGCTTCAGTTTGCAAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGCTGGCATGAATGTTCTCCAGAATATACAACTGCAAACTTTTATCAAGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCGACCTAGTATGGAAGAAGGGTCAGATGATGAAGAATCTAAAAGTTCTCAATCTTAGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAATTGACTTGGGTTTCTCATACCATTGAACATCTCAAGCAAGTTCTTCTAATCAATTTGAAAGGATGTTCAGGGCTTTGTGTACTTCCAAGAAGCATCTACAAGTTGAAATCTCTCAAAACTCTCATTCTCTCAGGATTTTCATTGATTGATAAGCTAGAGGAAGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTTATGCACTACTAAGATTAAAGAGCATTGTGTATATTACATCCATTATCAGAGACCTTCCACAGGTTCAGAATGTTAGGATGGAGTGTGGCTCACAACTCCAAATAACAGGAGATGTAGCTTCAGATACTTGTAATGTCACAAACTGCAATGAAATGATAGTGTCATCATGTGCATCATCAGTTGGTTGTTGCAGTGAAGGTGATGTTGCTGAATCAGAAAATTCCTTGAATTCAATTTTAATCCAAATGAGAATGAATTGTTCTATCACAAAGGCACTCAGAGAGAATATTTTGCAGGTATTTCAAAATATTGTTGGAAATGCTGACCATTGA 1488 0.3629 MKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRKVYEWRNVLNKFKAIPNNDVQKKLKISFDGLSDDRDREIFLDVAFFFIGMDKNDVIDILNGYGHSAEIGINVLMERCLITVDTKGKLGMHGLLRDMGKEIIRESLPMKPEKRSRLWNPEEVLNGTKAIEGLALNLPKSLNPTQLKTEAFKEMKRLRLLQFANVQLVGDFKYLSTDLRWLCWHECSPEYTTANFYQGNLVAIDFKYSKLDLVWKKGQMMKNLKVLNLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTWVSHTIEHLKQVLLINLKGCSGLCVLPRSIYKLKSLKTLILSGFSLIDKLEEDIEQMESLATLMADKTAITQVPYALLRLKSIVYITSIIRDLPQVQNVRMECGSQLQITGDVASDTCNVTNCNEMIVSSCASSVGCCSEGDVAESENSLNSILIQMRMNCSITKALRENILQVFQNIVGNADH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1584 495 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 4 399 - -
Amo19g1584 495 SUPERFAMILY L domain-like 196 408 - -
Amo19g1584 495 SUPERFAMILY "Winged helix" DNA-binding domain 74 177 IPR036390 -
Amo19g1584 495 Gene3D - 3 87 IPR042197 -
Amo19g1584 495 Gene3D Ribonuclease Inhibitor 184 490 IPR032675 -
Amo19g1584 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 97 IPR027417 -
Amo19g1584 495 PRINTS Disease resistance protein signature 38 52 - -
Amo19g1584 495 PRINTS Disease resistance protein signature 271 287 - -
Amo19g1584 495 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 399 IPR044974 GO:0006952
Amo19g1584 495 Coils Coil 358 378 - -
Amo19g1584 495 Pfam NB-ARC domain 4 73 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1584 Amo-Chr19 37864407 37866453 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1584 4 359 WRKY Transcription Factor Family AT5G45050 30.670 8.83e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1584 - - ahf:112727920 824.698