Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1582 ATGGTGAAGTTATACAAAATGATATTTTTATTTGGTGGTTTAATTTTTGCATTTGTGARGAMATTTGTCCCAWACATCCAGGATAGGGAGGAGGATTATCTAAGGAGGGAGCTTCTTTTGTTTTTGAGAGACCAAGTTAAAAGAAAAGCGCATAACTTTGACTCAACAAGAAAGTTATGGTGGGAAGGAGTTCGTTGCTTAAAGGTACTTCTTATCCTTGATAATGTGAGAAGTGAAAGAGAGCTGGAGGTTTTGCCAGTAACTCGTGAAGGCTTTGGTCCAGGGAGTATAATAATCATCACGACAAGGACTAAACATGATCGACCTCATGCGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCTGAAAAAAGTATAGAAGAGTGGGAGAATATATTGGACAGCTTCAAAAGATTCCCCTTTCAAGATGTATGGCAGGTTTTAAAAGAAAACATAGATTCTGTTGGATCTGAAGAAAAGAAAATATTCCTTGAACTAGCTTATTTGAGACATCTCTTTATTGGAATGAATCGAAATGATATAAGTCAGATATTACAAGAAGCTGGACATTATGCCGCAACAATAGCAATTAAAGGACTTGAAGAGCATAGTCTTGTGTGGTTTGATGAGGACAAGCTTTGCATGAATCGTTTGCTACAAGACATCGGAAGAGAAATGCTGGAATGTGGCTCACAACTTCAAATTATAGGAGATGTAGTTTCTAATACTTTTGATGTCACAAACTGCAATGAAATGAAAGTAACATCAAGTGCTTCAAATATCTCAAAAGGGAGTAGCTCATCATTAATTGGTTACTGCAGTGAAGATGACATTATTGAATCAGAAAATTCCTTGAATTCAATTTTAATTCAAATGGGAATGAGTTGTTCAGTCACAGAGTTACTTAGGGAAAATATTTTGCAGAAGTTTAATGCAAGAGTACCTGGAGATTGCTTGCTTCCTGGCAACAAGAATCCTGATTGGTTAACATTCAGTTGTGAAGGTTCTTTTTTAAAGTCAGTGATGTTGTGTATCATCTATTCTTCTTCCTCAAACATTGTACCTTTAGAAGGCCCTATCATTAAAAATTTGTGTATCATAAATCATACAAAGACCACCCCTTTTCTCTACGATGGAGATACACTGGCTTCACTTAGAGATGATGAATGGCAGAAAGTAATAGCGAACCTTGAAGCTGGTGACAAAGTGCAGATTGTTGTTTCTTCCGGATTAGGATTCACTGTGAAGAAGACAGCAGTTTATCTCATATATGCAGAGCAACAAGCTGAAGGTATTGTTTGTGGTGATGATATGGTAGCAGATGGAAATATCATTGTTCATGATGGAGAAGAAAATGATTTACTTCAAGGAGTAAACAAGAATTTCTCAAAAAAAAATTTGAAGTCACATACAAAACGAAAATTCAAAGAGTATGATGATACCAATCATTAA 1602 0.3596 MVKLYKMIFLFGGLIFAFVXXFVPXIQDREEDYLRRELLLFLRDQVKRKAHNFDSTRKLWWEGVRCLKVLLILDNVRSERELEVLPVTREGFGPGSIIIITTRTKHDRPHAIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSFSGLINYAIEYSDGLPLALVCVGSAVSEKSIEEWENILDSFKRFPFQDVWQVLKENIDSVGSEEKKIFLELAYLRHLFIGMNRNDISQILQEAGHYAATIAIKGLEEHSLVWFDEDKLCMNRLLQDIGREMLECGSQLQIIGDVVSNTFDVTNCNEMKVTSSASNISKGSSSSLIGYCSEDDIIESENSLNSILIQMGMSCSVTELLRENILQKFNARVPGDCLLPGNKNPDWLTFSCEGSFLKSVMLCIIYSSSSNIVPLEGPIIKNLCIINHTKTTPFLYDGDTLASLRDDEWQKVIANLEAGDKVQIVVSSGLGFTVKKTAVYLIYAEQQAEGIVCGDDMVADGNIIVHDGEENDLLQGVNKNFSKKNLKSHTKRKFKEYDDTNH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1582 533 Gene3D - 15 110 IPR027417 -
Amo19g1582 533 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 28 276 - -
Amo19g1582 533 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 276 472 - -
Amo19g1582 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 215 IPR027417 -
Amo19g1582 533 Pfam NB-ARC domain 68 205 IPR002182 GO:0043531
Amo19g1582 533 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 276 IPR044974 GO:0006952
Amo19g1582 533 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 276 472 IPR044974 GO:0006952
Amo19g1582 533 Gene3D - 123 209 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1582 Amo-Chr19 37827684 37836268 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1582 68 277 WRKY Transcription Factor Family AT5G45050 32.227 1.45e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1582 - - ahf:112749552 430.254