Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1517 ATGGAAGAGATATTTGTTCCATTTCGTGGAATAAAGAATGATCTTCAAGGAAGATTCATGGGTTACAAGCAAGATTGGATTGGTGGTCTCAATGCTGGTTTCAGCAATTCCAGATATTTCATTTGGAGAACAATTGGAAAGAGATACAGGGTATGCTTGTGGACAGCAGTTTTCTTGTTCCTGTTGGCTATCTTGGGAGCTTGCTCCATCATCAACAGGTTTACGCGCATAGCCGGGCAATGCTCTTCATGCAAGAGGCTATTAGGATCTGGAAATGGCATGTTTGCTTTGGTTCTGTCCTTTGGCCTACTGCTTACAGCATTGAGAAGCCGAAAAGCAAGGTCTTGGCGGTATGGTTCAGCTGGTAGTGTTCCAAAAGGAATTCCTAGCCGTCTCTTAAGTCTGAATCCATGGTCCCCGGGTTATATTATGTGGTCTAATTGGAATTCCCCCATCAAATGGTGTGATTCCACAATCTCCAATGCATACCAAAAGCTTAGCTACACTAAAGCACCAGAGTTGAAAGAGTCAATGATTCAATTGACATCAAGCATGGAGAGTATGAATGCTGCAATTGATGAGTCAGTATTTGATGTCGAAAAGGAAATCAATGACATGTTGCCTATCGAGGTTAAAGAACAACGAGTGAACAACTTACTCCAATCTTTGATGGTAGGGGGATGCATAGCAGCAATGCCAGTCCTGAAAATGATTCCAACTTCTGTACTCGGGGGTTATTTCGCTTTCATGGCCATTGAAAACTTACCCGGGAACCAGTTCTGGGAACACATTTTACTAATTTTCACTGCTCCGAGCAAAAGATCCAAGTATTGGCCTAAACACCATTTCAACTCCCCAGAAAATTCATTTGAGTTTCATTCTCTAACTTGCTTTTTTGCTCTTTTCTCTTCGACTGTGTACTTGATTGTTTGTTTTGGTATCACATGGATTCCAATTGCTGGGGTTCTGTTCCCTCTTATGATCATGCTTCTTGTTCCTGTAAGACAATACATTCTGCCCAAGTTTTTCAAAACCGCGCACCTCCAAGATTTAGATGCTGCGGAATATGAAGAAGTACCCGCCACACCGTTCGACCAAGCCACAGAGGGAGACTTGGGCAAGACAGCTTCCTTCACAGATGATGGAGAGATTCTAGATGGTCTAATTACTCGAAGCCGGGGTGAGATAAGGTGCATTTGCAGCCCAAAGACAAGGAGCTCCACTCCACCAACTGGAGAGATGGCAAATTTTCAGAGAAGTTCGAGCTTGCCAGATAGAGTATACAGCCCTCGGATAAGAGAATTAAGAGGAAATCACAGCCCTCAAGGTGTTGATGGAAAAGGACCATTTAGTCCGGCTGAAGCAAGGGACTCCGATCTGAGTAACGGTGGTTGA 1395 0.4373 MEEIFVPFRGIKNDLQGRFMGYKQDWIGGLNAGFSNSRYFIWRTIGKRYRVCLWTAVFLFLLAILGACSIINRFTRIAGQCSSCKRLLGSGNGMFALVLSFGLLLTALRSRKARSWRYGSAGSVPKGIPSRLLSLNPWSPGYIMWSNWNSPIKWCDSTISNAYQKLSYTKAPELKESMIQLTSSMESMNAAIDESVFDVEKEINDMLPIEVKEQRVNNLLQSLMVGGCIAAMPVLKMIPTSVLGGYFAFMAIENLPGNQFWEHILLIFTAPSKRSKYWPKHHFNSPENSFEFHSLTCFFALFSSTVYLIVCFGITWIPIAGVLFPLMIMLLVPVRQYILPKFFKTAHLQDLDAAEYEEVPATPFDQATEGDLGKTASFTDDGEILDGLITRSRGEIRCICSPKTRSSTPPTGEMANFQRSSSLPDRVYSPRIRELRGNHSPQGVDGKGPFSPAEARDSDLSNGG* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1517 464 MobiDBLite consensus disorder prediction 400 464 - -
Amo19g1517 464 MobiDBLite consensus disorder prediction 401 425 - -
Amo19g1517 464 PANTHER BORON TRANSPORTER 3-RELATED 91 120 - -
Amo19g1517 464 PANTHER ANION EXCHANGE PROTEIN 171 449 IPR003020 GO:0005452|GO:0006820|GO:0016020
Amo19g1517 464 PANTHER BORON TRANSPORTER 3-RELATED 171 449 - -
Amo19g1517 464 Pfam HCO3- transporter family 209 274 IPR011531 GO:0006820|GO:0016021
Amo19g1517 464 PANTHER ANION EXCHANGE PROTEIN 91 120 IPR003020 GO:0005452|GO:0006820|GO:0016020
Amo19g1517 464 PANTHER BORON TRANSPORTER 3-RELATED 1 35 - -
Amo19g1517 464 PANTHER BORON TRANSPORTER 3-RELATED 50 80 - -
Amo19g1517 464 PANTHER ANION EXCHANGE PROTEIN 1 35 IPR003020 GO:0005452|GO:0006820|GO:0016020
Amo19g1517 464 PANTHER ANION EXCHANGE PROTEIN 50 80 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1517 Amo-Chr19 34964950 34968941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1517 173 448 Antiporters AT3G62270 61.011 6.93e-106 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1517 K24194 - gmx:100795777 395.586