Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1514 ATGAAATTACCCTTCATTGCTGAAGAACAAGGTTCCACCTTTCTCTCTTCAGAAAACTCTATCCCACTCAAACTCCAAAACCCACCTCCAAATTTGCCTCTTTTGTATCACACAGCAAGAGTCTTCACCACCAACGCAAGGTACAGGTTCAACATGAAGAGAAACGGCACCAACTTTGTGCGTTTCCATTTCTACGCTTTTAAAGCTCCGAGTGTTGACCTCAAGCATGCTAAATTCAGTGTCTTTGTTAATGGGGTCTCACTTTTAAGGCCTGTTGCTACTGGTGGTGGTAGCAACTCAGGATTTGGATTTGTGAATGGTTTAGAGGTTTTTTCTGCTCCTGAAGATTTTGTTACAGATTATGGAGCTAGGTTTGTTGGTGCTTCTGGGGTGGAAGAGTTCAAGAACCTTTCATCTCAGGTTTTAGAAACTGTTCATAGGATCAATGTTGGTGGTTTGAAAATAACACCATTTAATGATACCCTTTGGAGGACTTGGATCCCTGATGAGGGTTTTCTTGTTTTCAAGCATGCAGCAAAGTCTGCATTTACTGATCACACACCAAATTACCAGAAGGGAGGGGCAACACCAGAGATTGCCCCTGATAATGTTTACATGACTGCTCAGCAGATGAATAGGGAGAACTCGAGTTTAGCTTCGAGGTTCAACATAACTTGGAATTTTTCTGTGGATACTGGTGGTGTTCCTCACCTTGTGAGGTTGCATTTCTGTGATTTCGTTAGCCCTGCGCTTAATTTGCTCTACTTTGATGTGTATATCAACGGCTACACTGCAATTAAGGATCTTGATTTGTCGTCCCTTACGTTCCACACGCTTGCTTCTCCATACTATGTGGATTTTGTCACTCACTCGGATGATTCCGGTATTATTCAAATAAGTGTTGGTCCTTCTGATCTTAGCAGTTCTATAAGGATGAATGCCATATTGAATGGAGCAGAGATACTGAAGATGGTCAATGTTATCGATTCCAGTGCTACACATTGGAAGAAAAGATTGTGGATTTGGATTGGTTCAGTTGCTGGAGGAATTGTTGTCTTGTGTTTAGTTGTAGCTGCTTTTCTACTTGCTATCAGATGCAGGAAGAAGAAACAAAAGCGAGGAACCGTCGAAAGCGTTGGATGGACACCTTTACAAATGTATGGAGGGAGTTCCAACAGTAGAATGTCTGAGCCTGGTTCTAATGGATACATTGGCTTGAAGATCCCCTTTGCAGATATACAATTCGCGACGAATGATTTCGATAAAAGTTTGGTGATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGCGTACTCAGAGACAATGTTAAGGTTGCTGTTAAGAGAGGCATGCCTGGGTCAAGACAGGGCCTTCCGGAATTTCATACTGAGATAACTGTTTTGTCCAAAATTCGCCATCACCACCTCGTTTCGCTGGTTGGTTTTTGCGAAGAGAATTCGGAGATGATACTTGTCTATGAGTATGTTGAGAAAGGTCCCCTTAAAAGGCATTTATACGGCTCGTCCGGCTTGCCACCTCTCTCGTGGAAGCAGCGTCTAGAGATATGCATTGGCGCTGCGAGAGGCCTCCACTATCTTCATACTGGGTTTGCTCAAGGAATCATCCACCGCGACATTAAATCGACCAACATTTTGCTTGATGAAAACTATGTGGCCAAGGTTGCTGACTTTGGCCTTTCAAGATCTGGACCTTGTATCAATGAAACACATGTGAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTACTTCCGGAGGCAGCAGCTAACCGATAAATCGGATGTTTATTCGTTTGGGGTTGTACTATTTGAGGTTCTTTGTGCTAGACCAGCAGTTGATCCGCAATTGACCCGGGAACAAGTGAATTTAGCAGAATGGGCCTTAGAGTATCTTGAGAAGGGTATGCTAGAGCATATTGTTGACCCTCGCATTGCAGGGCAGATTGAACCAAGGTCGTTGAAGAAATTTGGCGAAACGGCCGAAAAATGTTTGGCAGAATATGGTGTTGATAGGCCAACTATGGGTGATGTCTTATGGAATTTGGAATATGCACTTCAGCTTCAAGAAAGTGGACAACAAAGGGAGCCGCGAGCCGGTATCAGCGCCGACGAATCAGTGAATGTGACTACAACAATTGCTCCTGGAAATTCTTCCAGCAACAGAACAGTTGTGAGAGATTATTCAGATGTAAGTAGTAGTCAAGTGTTTTCCCAGCTAATGACCAATGAAGGCAGATAG 2268 0.4343 MKLPFIAEEQGSTFLSSENSIPLKLQNPPPNLPLLYHTARVFTTNARYRFNMKRNGTNFVRFHFYAFKAPSVDLKHAKFSVFVNGVSLLRPVATGGGSNSGFGFVNGLEVFSAPEDFVTDYGARFVGASGVEEFKNLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEGFLVFKHAAKSAFTDHTPNYQKGGATPEIAPDNVYMTAQQMNRENSSLASRFNITWNFSVDTGGVPHLVRLHFCDFVSPALNLLYFDVYINGYTAIKDLDLSSLTFHTLASPYYVDFVTHSDDSGIIQISVGPSDLSSSIRMNAILNGAEILKMVNVIDSSATHWKKRLWIWIGSVAGGIVVLCLVVAAFLLAIRCRKKKQKRGTVESVGWTPLQMYGGSSNSRMSEPGSNGYIGLKIPFADIQFATNDFDKSLVIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFHTEITVLSKIRHHHLVSLVGFCEENSEMILVYEYVEKGPLKRHLYGSSGLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLTREQVNLAEWALEYLEKGMLEHIVDPRIAGQIEPRSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYALQLQESGQQREPRAGISADESVNVTTTIAPGNSSSNRTVVRDYSDVSSSQVFSQLMTNEGR* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1514 755 Gene3D - 6 99 - -
Amo19g1514 755 Gene3D - 141 326 - -
Amo19g1514 755 Gene3D Phosphorylase Kinase; domain 1 390 495 - -
Amo19g1514 755 SUPERFAMILY Protein kinase-like (PK-like) 397 692 IPR011009 -
Amo19g1514 755 ProSitePatterns Protein kinases ATP-binding region signature. 426 448 IPR017441 GO:0005524
Amo19g1514 755 Pfam Protein tyrosine and serine/threonine kinase 425 622 IPR001245 GO:0004672|GO:0006468
Amo19g1514 755 Gene3D Transferase(Phosphotransferase) domain 1 496 716 - -
Amo19g1514 755 CDD STKc_IRAK 426 692 - -
Amo19g1514 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Amo19g1514 755 MobiDBLite consensus disorder prediction 702 732 - -
Amo19g1514 755 SMART serkin_6 420 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1514 755 MobiDBLite consensus disorder prediction 713 732 - -
Amo19g1514 755 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 726 - -
Amo19g1514 755 ProSiteProfiles Protein kinase domain profile. 420 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1514 755 PANTHER OS07G0166700 PROTEIN 9 726 IPR045272 GO:0004714|GO:0006468
Amo19g1514 755 Pfam Malectin-like domain 101 323 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1514 Amo-Chr19 34693687 34696713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1514 35 755 Receptor kinase-like Gene Family AT3G46290 49.418 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo19g1514 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1514 - - gmx:100801169 1172.92