Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1475 ATGGAATTTAACATGCCTGAGGAGGCAAGAGGTTTCTATAATAACTATAGCCGCATTAAGGGGTTTGCAACAAGACAAGGAAAGAAGGTAAGAAATATTGTCGGAGAGATTGTTAGGTACACTTTTACTGATAGAAAGAGGGAGCATAAAGTGGTAACTCGATGTGGTTGTGTGGCCGAGATGAGGATTAATAGGAAAGACGGTAGCGGAAAGTGGTTTGTCTCACGATTTATTGATGAGCACAGTCACGAGCTGCTGCTGGGGAAGTTTGTTGATTTCTTGAGATCACACAGGAAAATTTCAGAGGTTGAGATTGCTCACCTAACCAGCATGCGGGATATAGGAATTAGCATTCCGAAGATCTATGAATCGTTTGCAGCCCAGCTTGGTGGCTTCAACATGGTCTCGTTTACAAAGTAA 420 0.4262 MEFNMPEEARGFYNNYSRIKGFATRQGKKVRNIVGEIVRYTFTDRKREHKVVTRCGCVAEMRINRKDGSGKWFVSRFIDEHSHELLLGKFVDFLRSHRKISEVEIAHLTSMRDIGISIPKIYESFAAQLGGFNMVSFTK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1475 139 Pfam FAR1 DNA-binding domain 12 86 IPR004330 -
Amo19g1475 139 PANTHER OS07G0283300 PROTEIN 1 107 - -
Amo19g1475 139 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1475 Amo-Chr19 33185268 33185732 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g1475 FAR1 5.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1475 - - adu:107484803 255.373