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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Amo19g1468
ATGGCAATTAAGGAATCAGAGATGGCACTTTCATTATCATCATCATCATCACAACCATCACAAGTAGATGTTCACTGCTTTCAAAGCCTTAAGAATAATGCAAATGCAAGTTCTCTCAATCGTGACACCTTCTACCTCAAACTCACTCACTTGTTCGATTCCTCTGGACTCACCCTAATTTTCAATGTCCGAGAAACACTGCTGGACTTGTACCTAGTTTACTTGGAGGTGACCACAAGAGGAGGATTCCATCAGGTTAGTCAAGAAAAGAAATGGGGCGAAGTGGCCTCGGCCCTGAGATTGGAAGGAAACATTGCAAGATTATCTGCTCAAGTTGAAAAGCTCTACTTGCAACTTCTTTACCAATTCGAGCAATTGTACTTCTACAGAGCTCCTACAAAGAGCAGCAAGACCACAGGTTTGCACAAGAGGAAGCAAATCTCATCCGAAACGACAGAAGAAGGAGGAGCTGGGTTGGTCAAAGAGCAAGCTCTTCTTCTCGAACCTTCGGATGGCAAAGAAAAGAAGAAACGCCGAGGCATGGCACAAGGACAAAGAAGTGCATACCAGATGTTCCTGAAGCAAGAATGCACTCGGTTGAAAAGTTGTAACTCGACCTCAACCGGAAAGGGTATTCTCCACACGGCTATCGATTCGTGGAGGAATATGTCTCCACTTGAGAAACAGCCATATGTGGATGAATTCAAGAAGAACCAGGAAAAGTTCAAGAAAGGAATGATTATTGATGACAATGGAGAGCACAAAATAATGCAAAATGAGAAGGAAGAGAAGAACATGGCTCCTGCTAGTGTGTGTAATAGTGAGTACTACCAAGTAACTTCACAACCTGAGCCAGATAACAATAACTACACTACTCTCAACAACAATGCAGCAATAGGCTTAGCTTTTAATGTGACTGAAAAGTTTCCCAAGGATTCCGTGTTACTATTTGGCTTATAG
960
0.426
MAIKESEMALSLSSSSSQPSQVDVHCFQSLKNNANASSLNRDTFYLKLTHLFDSSGLTLIFNVRETLLDLYLVYLEVTTRGGFHQVSQEKKWGEVASALRLEGNIARLSAQVEKLYLQLLYQFEQLYFYRAPTKSSKTTGLHKRKQISSETTEEGGAGLVKEQALLLEPSDGKEKKKRRGMAQGQRSAYQMFLKQECTRLKSCNSTSTGKGILHTAIDSWRNMSPLEKQPYVDEFKKNQEKFKKGMIIDDNGEHKIMQNEKEEKNMAPASVCNSEYYQVTSQPEPDNNNYTTLNNNAAIGLAFNVTEKFPKDSVLLFGL*
320
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Amo19g1468
319
Pfam
HMG-box domain
183
246
IPR009071
-
Amo19g1468
319
ProSiteProfiles
ARID domain profile.
38
128
IPR001606
GO:0003677
Amo19g1468
319
SMART
bright_3
39
129
IPR001606
GO:0003677
Amo19g1468
319
PANTHER
HMG (HIGH MOBILITY GROUP) BOX PROTEIN
145
311
-
-
Amo19g1468
319
PANTHER
HMG (HIGH MOBILITY GROUP) BOX PROTEIN
31
150
-
-
Amo19g1468
319
PANTHER
HIGH MOBILITY GROUP B PROTEIN 9
145
311
-
-
Amo19g1468
319
PANTHER
HIGH MOBILITY GROUP B PROTEIN 9
31
150
-
-
Amo19g1468
319
Coils
Coil
98
118
-
-
Amo19g1468
319
Gene3D
High mobility group box domain
168
247
IPR036910
-
Amo19g1468
319
SUPERFAMILY
HMG-box
171
244
IPR036910
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Amo19g1468
Amo-Chr19
32700231
32703119
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Amo19g1468
8
139
ARID Transcription Factor Family
AT3G13350
29.577
7.72e-12
63.2
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
ARID
Amo19g1468
ARID
5.7e-11
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Amo19g1468
-
-
adu:107465197
598.201
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Amo19g1468
19
32700231
32703119
Amo09g0890
09
17000410
17002892
hybridization
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