Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1464 ATGGCATCCCTCGAATCAATTATAAACGCTCCGGAACCTTCCACCAATAACCCCGAAACTACCTCACCCGATTCTGATTCCAATCCCAACAAACGCCGCAAAATCGGACACCGCACTGTCGCCGCCGATGCCTCTCTCAATCATCTCCATTGGACATCCCAATCCGAGCAGCAGATCTACTCCAYCAACCTCCTCCGCACCCTCCGCCACGTCCTCCGCCGCAACCCTTCCCCCTCCACCACCGCATCAAAGCCCCGCCAGGTCCGCTACGCCGCCGACAGAGTCCTCGCCGCCGCCGCCAARGGCAGAACGCGCTGGAGCCGSGCCATCCTCTCATCTCCGCCGCCCTTCAATAACCGCCGGATGCTCCACAAGAAGGCCCCCGCCGCCAGGAAGAAGGTCACCGGATTGAGAAGTATGCGTAACGGAACGGAAAAGAAGAAGTTACCGGCCGTTSAGAGAAAARCGCGCGTTCTTAGCCGGTTGGTTCCCGGTTGCCGGAAGCTCTCTTTCCCTAACCTTCTAGAAGAAGCCACTGATTATATCTCCGCCTTGGAGATGCAAGTGCGCGCCATGACCGCTCTCGCCGAGTTACTCGCTGGTGGTGGCTCGCCGAGTGGACTCGCCGGTGAATCGTTAAGTTGA 645 0.5829 MASLESIINAPEPSTNNPETTSPDSDSNPNKRRKIGHRTVAADASLNHLHWTSQSEQQIYSXNLLRTLRHVLRRNPSPSTTASKPRQVRYAADRVLAAAAKGRTRWSRAILSSPPPFNNRRMLHKKAPAARKKVTGLRSMRNGTEKKKLPAVXRKXRVLSRLVPGCRKLSFPNLLEEATDYISALEMQVRAMTALAELLAGGGSPSGLAGESLS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1464 214 CDD bHLH_AtIBH1_like 145 196 IPR044549 GO:0006355
Amo19g1464 214 MobiDBLite consensus disorder prediction 1 25 - -
Amo19g1464 214 MobiDBLite consensus disorder prediction 1 37 - -
Amo19g1464 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Amo19g1464 214 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 21 202 IPR044660 GO:0006355
Amo19g1464 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 201 IPR036638 GO:0046983
Amo19g1464 214 PANTHER TRANSCRIPTION FACTOR BHLH149 21 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1464 Amo-Chr19 32400330 32401412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1464 50 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 50.000 3.44e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1464 - - adu:107465172 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0409 16 6602581 6603473 Amo19g1464 19 32400330 32401412 PCT
Amo19g1464 19 32400330 32401412 Amo16g0409 16 6602581 6603473 PCT