Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1454 ATGTCGGACACCGAAGGCATAGACCAATACGGCGTGCTCCTCTACTACAAGTATGCCCACATCCCCAACCTCGACGACCTCCTCTCCTTCTATCACTCCAACTGCTCCCAACTCTCCCTCCTCGGCCGCGTTCGCCTCTCTTCCCGCGGCGTCAATGTTACTGTTGGTGGGAAATTGTCGTGCTTGGAGAGCCACATTGAAGCCCTCAAGGCCAAGGACTGTGTGTTCGAAGGGACCGATTTCAAGCTTGCTACTTGTGACGAGCCGCTAAACGATAGGGTCGCCGAGGAGTGTGGATTCACTTCTCTCTCCATTCGAATCGTCGAGGAACTAGTTACTCTCAGTTCTCATCCCTTGTTAAAGTCACCGGAGATTTCAAATGCTGGAAGACATCTTTCAGCATCTGAGTTTCATTCTTCCCTTCAAAATGCTGATCAGAAGAGTCAAGGAAACGGCCTTGTGTTACTTGATGCAAGGAATCTGTATGAAACAAGAATCGGGAAATTCCATGCACCAAATGTCGAAACTTTGGATCCACAAGTTAGGCAGTATAGTGATTTATCCTCGTGGATAGATGATAATAGTGAGCAGCTGAAAGGAAAACATGTCCTTATGTATTGTACTGGAGGAATCAGGTGTGAAATGGCATCTGCGTATATTAAGTCAAAAGGTGCTGGCTTTGAGAATGTGTTTCAGTTGTTTGGTGGTATCCAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAGGGGAAAAATTTTGTGTTTGATCACCGGATTTCTGTAGGAAGTTCAGATAGTAATGTTCTTGGTACCTGCCTTATCTGTCGTCGTTCATTTGATGATTATTCTTCACGCTGCCGATGTACTTATTGTAGAATGCTTGTCTTAGTTTGTCATAATTGTCAGAATGAAGCTGCATTGTATGTTTGTGAGTTGTGCCAGAAGCAGGGCAAAGCTATTCAGTCAATGCAGTTAATTGGTACTGGTGAATTGAAAACCCCATTGGAAGGTGCTGAGTTGCAAAATTCATCTTCAAATGCTACATTATTACCTCAAATGCCTAAGGGAGATGATGTCAGGTCCTCTAGAAAGCTTAGAATCTTATGCTTGCACGGGTTTCGGCAGAACGCTTCCAGTTTTAAGGGAAGAACATCATCATTAGCAAAAAGACTAAAGAAAATTGCCGAATTTGTTTTCGTGGATGCACCTCATGAGTTGTCATTCATTTATCAAACAACTTTGGCCAAAGATGCGACTTGTGAATCATCTCCAATGCTGTCTAGTCCACCTCCACCTTTGGAGAATTGCAAGAAGAAATTTGCATGGTTAGTAGCTCCCAATTCTGATGGAAGTACTGATGTCAATTGGAAGGTAGCAGAAGGCCCATTCGATCCACTTCAATACCAGCAACAAACTGAAGGATATGATACTTCCCTGTCACACTTGAAGAACGTTTTTTCCCAACAAGGGTCATTTGACGGTATCTTGGGATTTTCACAGGGAGCGGCGATGGCGGCTTTAATCTCTGCGCAACAAGAACAACTAAAAGGTGAAATGGACTTCAAATTTGTAATAATATGCTCAGGCTTTTCTCTCAATGTAAAGGAGATGGAACGCGGCATCATCAAGTGCCCTTCTCTTCATATTTTCGGCAATGAACATGGTAAGGACAGGCAGATAGCCAACCAAGCAAGCAAGGAACTTACTTCATTGTATGACGATGGTTGTTCTGTGATAATTGAACATGATTGTGGTCACATAATTCCTACTCGATCGCCATATATTGATGAGATAAAGGGTTTCCTTGGACGTTTTCTGTAA 1827 0.433 MSDTEGIDQYGVLLYYKYAHIPNLDDLLSFYHSNCSQLSLLGRVRLSSRGVNVTVGGKLSCLESHIEALKAKDCVFEGTDFKLATCDEPLNDRVAEECGFTSLSIRIVEELVTLSSHPLLKSPEISNAGRHLSASEFHSSLQNADQKSQGNGLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDLSSWIDDNSEQLKGKHVLMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDSNVLGTCLICRRSFDDYSSRCRCTYCRMLVLVCHNCQNEAALYVCELCQKQGKAIQSMQLIGTGELKTPLEGAELQNSSSNATLLPQMPKGDDVRSSRKLRILCLHGFRQNASSFKGRTSSLAKRLKKIAEFVFVDAPHELSFIYQTTLAKDATCESSPMLSSPPPPLENCKKKFAWLVAPNSDGSTDVNWKVAEGPFDPLQYQQQTEGYDTSLSHLKNVFSQQGSFDGILGFSQGAAMAALISAQQEQLKGEMDFKFVIICSGFSLNVKEMERGIIKCPSLHIFGNEHGKDRQIANQASKELTSLYDDGCSVIIEHDCGHIIPTRSPYIDEIKGFLGRFL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1454 608 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Amo19g1454 608 SUPERFAMILY alpha/beta-Hydrolases 358 608 IPR029058 -
Amo19g1454 608 Pfam Serine hydrolase (FSH1) 365 599 IPR005645 -
Amo19g1454 608 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Amo19g1454 608 SMART rhod_4 139 246 IPR001763 -
Amo19g1454 608 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 8 607 - -
Amo19g1454 608 Gene3D - 2 112 - -
Amo19g1454 608 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 123 263 IPR036873 -
Amo19g1454 608 Gene3D alpha/beta hydrolase 363 608 IPR029058 -
Amo19g1454 608 SUPERFAMILY FYVE/PHD zinc finger 269 318 IPR011011 -
Amo19g1454 608 Pfam Rhodanase C-terminal 251 316 IPR022111 -
Amo19g1454 608 Gene3D - 121 278 IPR036873 -
Amo19g1454 608 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 8 607 IPR020936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1454 Amo-Chr19 32080725 32086008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1454 5 608 Sulfurtransferasese or Rhodanese AT1G09280 64.851 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1454 - - gmx:100786152 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1454 19 32080725 32086008 Amo19g1454 19 32080725 32086008 ECH