Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1448 ATGGTTATCTTTTTCTCCTTCCTCCGCCTGATCGCCATCAAAACGAGTCCCGGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGCAAGAACCTCCTACGCGCTATCGACGGCGGGCTCCGTTTCATCGGTGGCCACAACAGAGTCACCGTGGACCGTTCCATTTGCTTCTCAAATCCATTTTTTAGCGTTGTAGGAGCGTTGTGCGGTTCGTCTGTGACGTTCTGGTGTCAATTGCCGAACGAAGACTTAGAAACCTTGATCTCCCTCACCAACGACGAAGATCTGACGAACATAAGCAAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAATACCAGAGCCATGCTGTTTCGGCCATAA 372 0.5134 MVIFFSFLRLIAIKTSPGRTIKLLCSYGGKNLLRAIDGGLRFIGGHNRVTVDRSICFSNPFFSVVGALCGSSVTFWCQLPNEDLETLISLTNDEDLTNISKEYDRASSKLPHPLNTRAMLFRP* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1448 123 SMART PB1_new 35 121 IPR000270 GO:0005515
Amo19g1448 123 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 12 123 - -
Amo19g1448 123 SUPERFAMILY CAD & PB1 domains 38 110 - -
Amo19g1448 123 Pfam PB1 domain 40 109 IPR000270 GO:0005515
Amo19g1448 123 PANTHER OS05G0427100 PROTEIN-RELATED 12 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1448 Amo-Chr19 31989237 31989854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1448 21 109 MAP Kinase Kinase Kinase AT1G04700 44.944 1.11e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1448 - - aip:107611558 185.652