Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1432 ATGGCTCCCAAATCCAAATCCAAATCCAAAGCCAAAGCCAAAACCCCAAAACCCTCTCCTTCCTCCTCCTCCAAGTCCTCCTCCTCATCCTCCATCTTCAAACCTGGCACGAGAGTCGAGGTCAGCTCCGATGACGACGGATTCCGTGGTTCTTGGTTCTCCGGCACCGTCATCCGCCGCGCTGGTGCGGACAAATTCACGGTCGAGTACGACAACCTCTTGGCCGACGAGCGGGGCAAAAAGAAGCTGAGGGAGCAGCTCGGCTTCCACCAGCTTCGGCCGCTTCCTCCGGAGGAGGCCGGCGTCGAATTCAAGTTCGGCGATGAGGTTGACGCGTTCCACAACGACGGTTGGTGGGAGGGGAGTATCACGCAGGAGCTGGAGAATGGTATGTTCGCTGTTTATTTCAGAGGGTCGAAGGAGCAGATCGAGTTTACCGCGGACCAGCTGAGGAAACATCGCGAGTGGATGAATGAGAAGTGGGTTCCGCCGTTTGCGCAGCAAGAACAAGAAGAGAATATGGTGTCAGACCCAAATGCAAAGTCTGATAAAACTGTGAAAGGGAAAGAAGTGGTGGCGACACCAAATGTGACGTCTGATGATAAAGATGTGAAAGGGAAGGGAGTGATGTTGACACCAAATGTGTCATCTGATGATGAAGGGAAGGAAGTGGTGTTGACACCAAATATAAAGTCTGATGAAACTGCAGAAGAGTTCAATTTTAGTGCAGGGATGCTGGTTGAGGTAAGCAATGATGAGGAAGGTTTCCAAGGAGCTTGGTTTTCTGCCACTGTTGTTGAAGTAATTGGAGACGATAGGTTCCTTATAGAGTACAAGACCCTGCTGGACGATAATTCGAATCTTTTGAGAGAGGAGGCTGATAAGTGGCACATAAGGCCCCCTCCCCCAGCAACTTCTGAGAACATTAAATTCAGTTATCTTGAAGAAGTGGATGCTATGTACAACGATGGATGGTGGGTTGGTGTAATTTCCAAAGTTCTTGGCGACTCAAAGTACGTAGTATACTTCAGGAGCTCCAATGAAGAAATAGAGTTTCCAAACTCCCAGTTGAGGCCACATCTGGACTGGATTGGTGGCAAGTGGGTCTTGGCTTCTGAGGCGTTGAACTTGTTGTGA 1137 0.4978 MAPKSKSKSKAKAKTPKPSPSSSSKSSSSSSIFKPGTRVEVSSDDDGFRGSWFSGTVIRRAGADKFTVEYDNLLADERGKKKLREQLGFHQLRPLPPEEAGVEFKFGDEVDAFHNDGWWEGSITQELENGMFAVYFRGSKEQIEFTADQLRKHREWMNEKWVPPFAQQEQEENMVSDPNAKSDKTVKGKEVVATPNVTSDDKDVKGKGVMLTPNVSSDDEGKEVVLTPNIKSDETAEEFNFSAGMLVEVSNDEEGFQGAWFSATVVEVIGDDRFLIEYKTLLDDNSNLLREEADKWHIRPPPPATSENIKFSYLEEVDAMYNDGWWVGVISKVLGDSKYVVYFRSSNEEIEFPNSQLRPHLDWIGGKWVLASEALNLL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1432 378 SMART agenet_At_2 309 365 IPR014002 -
Amo19g1432 378 SMART agenet_At_2 31 100 IPR014002 -
Amo19g1432 378 SMART agenet_At_2 102 158 IPR014002 -
Amo19g1432 378 SMART agenet_At_2 239 306 IPR014002 -
Amo19g1432 378 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 14 373 - -
Amo19g1432 378 MobiDBLite consensus disorder prediction 1 48 - -
Amo19g1432 378 MobiDBLite consensus disorder prediction 14 37 - -
Amo19g1432 378 MobiDBLite consensus disorder prediction 168 187 - -
Amo19g1432 378 MobiDBLite consensus disorder prediction 197 221 - -
Amo19g1432 378 Pfam Agenet domain 244 303 IPR008395 -
Amo19g1432 378 Pfam Agenet domain 317 360 IPR008395 -
Amo19g1432 378 Pfam Agenet domain 36 97 IPR008395 -
Amo19g1432 378 Gene3D - 25 79 - -
Amo19g1432 378 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 14 373 - -
Amo19g1432 378 Gene3D - 226 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1432 Amo-Chr19 31616741 31619846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1432 253 363 PHD Transcription Factor Family AT5G58610 28.788 6.89e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1432 - - gmx:100805605 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1432 19 31616741 31619846 Amo19g1432 19 31616741 31619846 ECH
Amo19g1432 19 31616741 31619846 Amo09g0867 09 15845648 15857425 hybridization