Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1412 ATGGGGAAAGTAGGGGGTGTGATTCCATTCTTAGCCATGGCTATTGTGCAATCAAGCTATGCTGGGATGACTATTACTTCAAAGCTTGCAATACAATCTGGCATGAGCCCTCTTGTGCTTGTTGCCTACCGCCAAATCTTTGCTACACTCTCCCTTGCTCCCTTTGCTTATTGGTTTGAACGGAATACACTTCCCTGTATGACAAAACGTACCGGATTACAGATACTAATATCCTCCTTTACAGGAGTTACCGGAAATCAAATACTGTATTTCGTTGGGCTAAAATATTCAACCGCTACAATTGCAACTGCACTCACCAATTTGCTCCCAGCTTTTACTTTCATCCTTGCAGTCCTGTGCAGACAAGAGTTGTTGAGAATGAAAACAAGGGCTGGGCAAGCAAAGGTGCTAGGGACAGTTCTAAGTGTTGGTGGAGCCCTTCTTTTATCATTTTACCATGGAAAGCCCCTTGGTCTTGGGGATTCAGGTATTCACTGGAAATTTGTACAAGAAATGGACAGATCAAGTTCCTCCACTACTCCAACCAATTTGCTTCTTGGCCCTTTTGCTTTGATTGCCAGTTCTCTTGTTTGGTCTGTGTGGTTCATACTTCAAGCAGAAATAAGCAAGAACTACGCAGCTCCATATACGAGCAGCCTGTACATGTGTATGATGGCGAGCATTCAGTGTGTGGCCATCGCATTGTGTTCTGACCGCACCGTCTCAGCTTGGTCACTAAACAATCCCATCAGACTCTCCTCTGCACTTTATGCCGGAATAGTATGCACTGGGATAGGGTATGGGCTGATGGCCTGGACCATCGAAAGAAAGGGACCTCTCTATGTCTCTGTATTCACCCCTTTGACGCTTGTCATCACAGCTCTTCTCACCTGGGCTCTGCTTCATGATCAACTCTACGTTGGAACTGCAATTGGATCTGTGATTATAGTTTTGGGACTCTATGCTGTTCTGTGGGGAAAGAGCAACGAGAAGATGAACAAGAAAGAGGGTGTTCAAGTGACATCAGCAGATTCGGATTCAATAGTCAAGGATAAAGAAGACGATGATGACGAAATGAGTGTAATGGAAATGCAGTGCTGTGACCATTCCAATTGTAACCACAATAGTAAATAA 1134 0.4453 MGKVGGVIPFLAMAIVQSSYAGMTITSKLAIQSGMSPLVLVAYRQIFATLSLAPFAYWFERNTLPCMTKRTGLQILISSFTGVTGNQILYFVGLKYSTATIATALTNLLPAFTFILAVLCRQELLRMKTRAGQAKVLGTVLSVGGALLLSFYHGKPLGLGDSGIHWKFVQEMDRSSSSTTPTNLLLGPFALIASSLVWSVWFILQAEISKNYAAPYTSSLYMCMMASIQCVAIALCSDRTVSAWSLNNPIRLSSALYAGIVCTGIGYGLMAWTIERKGPLYVSVFTPLTLVITALLTWALLHDQLYVGTAIGSVIIVLGLYAVLWGKSNEKMNKKEGVQVTSADSDSIVKDKEDDDDEMSVMEMQCCDHSNCNHNSK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1412 377 MobiDBLite consensus disorder prediction 336 355 - -
Amo19g1412 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 328 - -
Amo19g1412 377 PANTHER WAT1-RELATED PROTEIN 8 368 - -
Amo19g1412 377 PANTHER WAT1-RELATED PROTEIN 8 368 IPR030184 GO:0016021|GO:0022857
Amo19g1412 377 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Amo19g1412 377 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Amo19g1412 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1412 Amo-Chr19 30767347 30771842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1412 7 358 Nodulin-like Gene Family AT1G09380 52.557 1.96e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1412 - - ahf:112709006 577.785