Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1407 ATGGGTTCTGATCTGAAAGTTGAATTGTCCAAGAAAACTCCAATTTTTGGTATTAAGGTTTGGGAAGTAATTGGAATTGCGGTTGGATTATTCATTATAGTGATCCTTTGTGTGCTCTCATTTTGCCTTAGTTCAAGGAAGAAGTCTAAAAAGGATAGAGATAACAAGGTTCCTGTTAGTCAAATACCRACKGTGTCGAAGGAAATCAAGGAGGTGAGGGTTGAGCAAGTGCCGGCGAATGGATTRGTCCCGCGAGATGGAATACTCCTCACWATTCATGATAAGTCCAGTGACAGAGAATCAGACAAAGTTATGGTTCACTTGGGTGTGGGGAAAATGAAGCATGGGGATAGTGGCAGCCACTCAGATTCATTTCATCACTTGGAGAAAGATGGATATGGATCACAGTCAGGGGAAGAAGGRAGCTCCGGCACGTTTAAAGCAGCATACAATCCGTCTTCTTCGTATCCTATWACAGCCCCTTCGCCTCTGTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACATTGAGGGATCTTGAACTTGCCACAAACCYGTTTTCGAAGGAGAATGTCCTTGGTGAAGGTGGCTATGGAGTTGTTTATAGGGGACAGTTGATAAATGGGACTTCAGTGGCAGTTAAGAGGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGGGTTGAAGTTGAAGCTATTGGCCATGTTCGACATAAAAATTTAGTTCGTCTTTTGGGGTATTGCATTGAGGGGACTCACAGGATATTAGTGTACGAGTATGTTAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCAATGCGTCATCATGGATATCTTACCTGGGAAGCGCGTATCAAGATTCTTCTGGGCACGGCTAAAGCGCTTGCTTATTTGCATGAAGCAATTGAACCYAAGGTTGTACACCGAGATATCAAGTCGAGCAACATATTAATTGATGACGACTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTGGGTGCTGGGAAGAGTCATGTTACAACAAGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTTTAAATGAGAAGAGTGATGTTTATAGTTTTGGTGTTGTGCTGCTCGAAGCAATTACCGGAAGAGATCCAGTCGACTATGGCCGTCCACCACAGGAAGTTAATCTGGTTGACTGGTTGAAGATGATGGTTGGAAACAGACGATCGGAAGAAGTAGTAGACCCGAACATTGAGGTGAAGCCATCAACCAGAGCTTTGAAACGGGCTCTCTTAACAGCTTTAAGATGTGTTGATCCAGATCATGTCAAAAGACCCAAGATGGGCCAAGTCGTACGAATGCTCGAGTCAGAGGAATACCCTTTACCCAGAGAGGATCGAAGGCAGCGAAGAAATTGTGGAAATAACTCGGAAATCGAATCCCAGAAGGATCATTCGGACACAGACAGGAGCGAGATTCAGGGTTCTGTATCAGAGAGTGGAGGGTAA 1530 0.4392 MGSDLKVELSKKTPIFGIKVWEVIGIAVGLFIIVILCVLSFCLSSRKKSKKDRDNKVPVSQIPTVSKEIKEVRVEQVPANGLVPRDGILLTIHDKSSDRESDKVMVHLGVGKMKHGDSGSHSDSFHHLEKDGYGSQSGEEGSSGTFKAAYNPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNXFSKENVLGEGGYGVVYRGQLINGTSVAVKRILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPPQEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDHVKRPKMGQVVRMLESEEYPLPREDRRQRRNCGNNSEIESQKDHSDTDRSEIQGSVSESGG* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1407 509 MobiDBLite consensus disorder prediction 466 509 - -
Amo19g1407 509 MobiDBLite consensus disorder prediction 466 499 - -
Amo19g1407 509 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Amo19g1407 509 MobiDBLite consensus disorder prediction 114 134 - -
Amo19g1407 509 ProSiteProfiles Protein kinase domain profile. 191 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1407 509 Gene3D Transferase(Phosphotransferase) domain 1 267 478 - -
Amo19g1407 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Amo19g1407 509 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Amo19g1407 509 CDD STKc_IRAK 197 463 - -
Amo19g1407 509 PANTHER OS01G0323000 PROTEIN 3 503 - -
Amo19g1407 509 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1407 509 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 503 - -
Amo19g1407 509 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1407 509 MobiDBLite consensus disorder prediction 114 146 - -
Amo19g1407 509 SUPERFAMILY Protein kinase-like (PK-like) 175 471 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1407 Amo-Chr19 30296780 30301309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1407 17 465 Trihelix Transcription Factor Family AT1G70460 40.308 2.87e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo19g1407 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1407 - - gmx:100787014 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1407 19 30296780 30301309 Amo06g0015 06 200128 204901 PCT