Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1372 ATGGTAGGACTCACCCTTATTCAAACTGCTGCTGCTCAAGGAGCAGTTTGTTTGGATGGATCATTGCCTGGTTACCATTTACATCGAGGATATGGATCAGGAGCAAATAGTTGGATCGTTAATTTAGAGGGAGGAGGATGGTGTAATGATGTCAGGACATGCATTTATCGCAAGAAAACTCGGCGCGGATCTTCAGCATTCATGGAAAAGGAGATACCTTTTACAGGAATATTAAGCAATAAGGCTGAACAAAATCCAGATTTTTTCAACTGGAACAGAGTGAAGATTCGTTATTGTGATGGTGCCTCTTTTGCTGGGGACAGTGAACATAAGGCTGCACGTCTGCAATTCCGAGGACAGCGCATTTGGATGGCTGCAATGGAGGATCTGATGTCGAAGGGAATGCGTTTTGCCCGGCAGGCTCTACTTTCTGGATGCTCAGCTGGTGGCCTGGCTACCATCATACACTGCGACGAATTTCGAGGTCTGTTTCCAAGGAGTACAAAAGTGAAGTGTCTCAGTGATGCTGGGCTATTTCTTGATGCGACCGACGTATCTGGTGGACACACACTCAGGGATTTTTTCAGTGGTGTTGTAGGGTTGCAGGGAGTGCAGAAGAATCTGCCGCGTACTTGTACCAATCACCTTGATCCCACATCGTGCTTCTTCCCACAGAACTTGATTGCCGGTATAAGAACCCCACTCTTCATTCTCAACACTGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCGACAACAGCGGACCCAGGTGGCAATTGGCATGATTGTAGAAAAAATTATTATAGGTGTTCTGGTTCACAGATCCAGTTTCTACAAGGTTTCAGGAATGAAATGTTGAATTCTATGAAAGGCTTCTCAAGATCAAATCAGAATGGAATGTTTATCAATTCATGTTTTGCTCACTGTCAATCTGAGAGGCAGGATACATGGTTTGCGGATAATTCTCCTGTCATTAGGGAAAAGGCAATTGCTCTGGCAGTTGGAGACTGGTTTTTCAACCGTGCTGTCGTTAAGGACATCGATTGTGCTTACCCTTGTGATAATACATGCCACAATCTGATCTTCAGATGA 1098 0.449 MVGLTLIQTAAAQGAVCLDGSLPGYHLHRGYGSGANSWIVNLEGGGWCNDVRTCIYRKKTRRGSSAFMEKEIPFTGILSNKAEQNPDFFNWNRVKIRYCDGASFAGDSEHKAARLQFRGQRIWMAAMEDLMSKGMRFARQALLSGCSAGGLATIIHCDEFRGLFPRSTKVKCLSDAGLFLDATDVSGGHTLRDFFSGVVGLQGVQKNLPRTCTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQIQSSLAPTTADPGGNWHDCRKNYYRCSGSQIQFLQGFRNEMLNSMKGFSRSNQNGMFINSCFAHCQSERQDTWFADNSPVIREKAIALAVGDWFFNRAVVKDIDCAYPCDNTCHNLIFR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1372 365 PANTHER NOTUM-RELATED 1 364 IPR004963 GO:0016787
Amo19g1372 365 Pfam Pectinacetylesterase 1 344 IPR004963 GO:0016787
Amo19g1372 365 PANTHER PECTIN ACETYLESTERASE 2 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1372 Amo-Chr19 28736809 28741491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1372 1 365 Carbohydrate Esterase AT1G57590 73.699 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1372 K19882 - gmx:100793403 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1372 19 28736809 28741491 Amo09g0802 09 13685784 13691570 hybridization