Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1366 ATGACAAAGGTGACCGGATGGAAGAGAGAAGAGGTGATGGATAAAATGCTTTTAGGAGAGGTTTTTGGGACTCAGATGGCTTGTTGTCGTCTTAAGAACCAAGAAGCTTTTGTTAATTTTGGTATTGTACTTAATAAAGCCATGACCGGTTTGGAGACAGCAAAGGTTGCTTTTGGTTTCTTTGCTCGTAGTGGGAAGTATGTAGAATGCCTGCTTTCGGTGAGTAAAAAATTGGACGTCGAAGGTGTAGTTACTGGGGTCTTCTGCTTCTTGCAGCTAGCTAGTCCAGAGCTGCAACAAGCATTGCATGTTCAGCGAATATCTGAACAAACTGCCTTGAAGAGACTGAAAGCTTTAACTTATATGAAGAGGCAGATCAGGAATCCTTTATCCGGGATGATGTTTTCGCGGAAAATGTTGGAGGCCACTGAGTTGGGAACGGAACAAAAGCAACTCCTACACACCAGTGCTCAGTGCCAGTGCCAGCTTAGCAAAGTTCTTGATGACTCAGATCTTGACAGCATCATTGATGGTTACTTGGATCTTGAGATGGCTGAATTCACTCTGCATGATGTATTGGTTGCTTCCCTTAGTCAAGTAATGCAAAGAGTAACACCAAAGCTATCCGAATAG 633 0.4329 MTKVTGWKREEVMDKMLLGEVFGTQMACCRLKNQEAFVNFGIVLNKAMTGLETAKVAFGFFARSGKYVECLLSVSKKLDVEGVVTGVFCFLQLASPELQQALHVQRISEQTALKRLKALTYMKRQIRNPLSGMMFSRKMLEATELGTEQKQLLHTSAQCQCQLSKVLDDSDLDSIIDGYLDLEMAEFTLHDVLVASLSQVMQRVTPKLSE* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1366 210 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 205 - -
Amo19g1366 210 SMART HisKA_10 114 179 IPR003661 GO:0000155|GO:0007165
Amo19g1366 210 Pfam PAS fold 1 92 IPR013767 GO:0006355
Amo19g1366 210 PANTHER PHYTOCHROME A 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1366 Amo-Chr19 28392817 28396776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1366 1 207 Histidine Kinase Gene Family AT1G09570 74.879 1.07e-102 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1366 K12120 - gmx:100790763 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1366 19 28392817 28396776 Amo19g1366 19 28392817 28396776 ECH
Amo19g1366 19 28392817 28396776 Amo09g0792 09 13339348 13345985 hybridization