Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1338 ATGCAAAAAAAAATAATCGGTGCAAGACACTATCTAAAAGGTCAACCTTCAGCAAGAGACATTGTTGGGCATGGAACTCACACAGCATCAATTGCAGCAGGGAATAAAGTAGTGGGAGCAAGCTTCTATGGAATTGCCGAAGGAGTTGCAAGAGGAGGTATCCCATCAGCAAGAATTGCTGCTTACAGTATGTGTAGTAAACGAGAGTGCAGAGCTGATGTCATATTGGTTGCTTTTGATGATGCCATTGCCGATGGTGTGGATCTTATCACAATTTTAATTGGGACAGATGAGCAAATGACCTTCGATGAATACATCATAGCAATTGGATCTTTTCAAACAATGGAAAAAAGGGATCTTCACTATAAACGCTGCAGAATCATTGATAACGTTTTGCTTGGCAATGGATTAATGCTTTCGGGGAAGTCAATAAATGGGTTTGCATCAAATGGGACAAAGATTCTATTGATCCATGTAAAGTTTGCTTCAAGTCCAAAATGTCCATCAGACAAAGATACCGAATTTTGTTTTTGTTTGGACCCCAAACGCATAAAGGGAAAAATCGTCTTGTGTAGAACTTCATTTGGTTATTCAGCGGGTCTTGCATCGGGAGCATTTGGCTCAATTTCAATCTCTTACGAATATGAAGCTCAAGTAGTTTCTTATCCTGCATTAGGCATAGATCCAGAGGCTTATGATGTTGCTTTGTCTTATGCAAATTCCACTACCACCCCTTGTGCTGAAATATTGAGTAGTACAGACTTTATAAATAATACTGCTCTAATTATTGCTGAATTCTCTTCTGTAGGACCCAATATGCAAATCAGAGAAATTATGAAGCCAGACATTAGTGCTCCTGGTATAGAAATTTTGGCTGCTTACTCACCTCTTGCACCACCTTCTCAGGATAAAACAGATAAAAGATCTGTGAAATACAACATACTCTCTGGAACCTCAATGTCATGCCCCCATGTTGCTGGTGCAGCTACATATGTTAAGACTTTTCGTCCTGATTGA 1017 0.3953 MQKKIIGARHYLKGQPSARDIVGHGTHTASIAAGNKVVGASFYGIAEGVARGGIPSARIAAYSMCSKRECRADVILVAFDDAIADGVDLITILIGTDEQMTFDEYIIAIGSFQTMEKRDLHYKRCRIIDNVLLGNGLMLSGKSINGFASNGTKILLIHVKFASSPKCPSDKDTEFCFCLDPKRIKGKIVLCRTSFGYSAGLASGAFGSISISYEYEAQVVSYPALGIDPEAYDVALSYANSTTTPCAEILSSTDFINNTALIIAEFSSVGPNMQIREIMKPDISAPGIEILAAYSPLAPPSQDKTDKRSVKYNILSGTSMSCPHVAGAATYVKTFRPD* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1338 338 ProSitePatterns Serine proteases, subtilase family, serine active site. 317 327 IPR023828 -
Amo19g1338 338 PRINTS Subtilisin serine protease family (S8) signature 316 332 IPR015500 -
Amo19g1338 338 PRINTS Subtilisin serine protease family (S8) signature 20 33 IPR015500 -
Amo19g1338 338 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 118 IPR045051 -
Amo19g1338 338 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 126 338 IPR045051 -
Amo19g1338 338 Gene3D - 128 256 - -
Amo19g1338 338 ProSiteProfiles Serine proteases, subtilase domain profile. 1 338 - -
Amo19g1338 338 CDD PA_subtilisin_like 130 249 - -
Amo19g1338 338 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 2 118 - -
Amo19g1338 338 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 126 338 - -
Amo19g1338 338 SUPERFAMILY Subtilisin-like 4 338 IPR036852 GO:0004252|GO:0006508
Amo19g1338 338 Pfam Subtilase family 16 337 IPR000209 GO:0006508|GO:0008236
Amo19g1338 338 Gene3D Peptidase S8/S53 domain 2 117 IPR036852 GO:0004252|GO:0006508
Amo19g1338 338 Gene3D Peptidase S8/S53 domain 257 338 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1338 Amo-Chr19 27300418 27301506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1338 2 337 Subtilisin-like Serine Gene Family AT3G46850 47.453 3.60e-95 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1338 - - ahf:112755736 429.869