Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1324 ATGAATGATTCAACTTCAAATCAGTTGAATGAGAATGATTTCGTAGGGATGATTTTCACGACACTAGAAGAAGATGAAAAGTTTTACAAACATTATTCCAAACTTGTTGGTTTTTCTACCAAAATAAGGAACACGACTCGGGATGGAGACAAGATTAAGAATCAACTAATCGTATGCAGCAGAGAGGGGAGGTGGAAATCCAAGATATCTCCAACTCTGAAGACAAATCCTTCAGCCAGGTTAAACTGTCCAGCCAGGATTTTATTCAAAGCGCTAGTTACACTATCCACTGAACTGTATGAAAATAAGAACAAATTTTATTCAAAACCTTAG 333 0.3634 MNDSTSNQLNENDFVGMIFTTLEEDEKFYKHYSKLVGFSTKIRNTTRDGDKIKNQLIVCSREGRWKSKISPTLKTNPSARLNCPARILFKALVTLSTELYENKNKFYSKP* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1324 110 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 90 - -
Amo19g1324 110 Pfam FAR1 DNA-binding domain 27 91 IPR004330 -
Amo19g1324 110 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1324 Amo-Chr19 26803734 26804556 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g1324 FAR1 1.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1324 - - aip:107614666 139.043