Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1302 ATGCCTTCGAACCCCGCCAGCGGCGAAGAAAGCGATGAAAAGCAAAGCTTCTCCTCCAAAAACAAATTCTCTTCCCGCAATTCTTCTTCCAAGTATGATTTCGTTAAGGTGAAGGTGCGGTTAGGTGATAATGCGGATCACTACTATATTCTATTCAGATTTTTGCTCAGTAGGATGCTAACTGTAACCAATATTCCAAATCATGTAGCTATTAAAATTGCTCTTGAACTGAAGAAGCTGCTCATTGACAATAGCCTTCTAGATGTGGAAATGGCCAGTGCTGGTTTATCTGGAACTCTTTCGTCCGGAATTAGAAATTTGAGCCATCTCCGAACATTAACAATCAGTTATCTGCGTTTCTCTAATTCCATGGTTCCTAATTCAATCATGCCAAGCTTTTCAGGTGGCTCAGCAAAAATATCTGGACAGATCCCTCCACTTGTTGCTAACTTGACAGGTCTTTCATTATTGGACTTGTCATTTAATAATCTCAGTAGTCCCACTCCAAAAATTTTGGCTAAAAGTTACAGATACAGGATCATCTCAAAAAGTCAAGAGTCATCACCAAAGGGTCTAGCTAAGGGTGTTGCTATTGGAATATCTATAGCTGGAACAAGTGGGGTTCTGCCATTATTAATTTGTGCTTGTGTTAGATATTTCCAGAAGAAGGAAGAAGAAAAAATTAAATTGCCAACAGAAGATTTTATATCAAGTTCAACCCAAGATGCATCTAGCAGTGGTGAATATGAAACTTCAGGATCGACAGCTGCTAGTGCTTCTGGCCTTCTGGCAATTATGGCGGCAAAATCGGTGGAATTCTCTTATCAAGAACTATCCAAGGCTACAAATAACTTCAGCTCTGATAACAAAACTGGTCAGGGTGGATTCGGAGCTGTTTATTTTGCAGAATTGAGAGGCCAAAAAGCAGCAATTAAGAAGATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTAAAGGTCTTAACACATATTCATCACTTGAATCTGGTGCATTTGAATGGATATTGCGTTGAGGGATCTCTTTCCTTGTGCCAATATTTGCATGGTACAGGGAGAGAACCTTTGGCATGGTCAACAAAAGTGCAAATTGCTCTGGATTCAGCAAGAGGACTTGAATATATACATGAACACACTGTTCTTGTTTATATCCACAATGAAATGAAACCTGCTAACATATTGATATATAAAAACTTTCGTGGAAAGGTTGCAGATTTTGGGCTAACTAAACTTAGGGAAGTTAGAAGCTCTTTATTACTTCATACTCGTCTTAATTTGTGGAGGTTTGAAAATCTCGCAAAATAG 1326 0.3891 MPSNPASGEESDEKQSFSSKNKFSSRNSSSKYDFVKVKVRLGDNADHYYILFRFLLSRMLTVTNIPNHVAIKIALELKKLLIDNSLLDVEMASAGLSGTLSSGIRNLSHLRTLTISYLRFSNSMVPNSIMPSFSGGSAKISGQIPPLVANLTGLSLLDLSFNNLSSPTPKILAKSYRYRIISKSQESSPKGLAKGVAIGISIAGTSGVLPLLICACVRYFQKKEEEKIKLPTEDFISSSTQDASSSGEYETSGSTAASASGLLAIMAAKSVEFSYQELSKATNNFSSDNKTGQGGFGAVYFAELRGQKAAIKKMDVQASTEFLSELKVLTHIHHLNLVHLNGYCVEGSLSLCQYLHGTGREPLAWSTKVQIALDSARGLEYIHEHTVLVYIHNEMKPANILIYKNFRGKVADFGLTKLREVRSSLLLHTRLNLWRFENLAK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1302 441 SUPERFAMILY Protein kinase-like (PK-like) 268 424 IPR011009 -
Amo19g1302 441 Gene3D Transferase(Phosphotransferase) domain 1 351 431 - -
Amo19g1302 441 Gene3D Phosphorylase Kinase; domain 1 247 350 - -
Amo19g1302 441 SUPERFAMILY L domain-like 85 178 - -
Amo19g1302 441 ProSiteProfiles Protein kinase domain profile. 285 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g1302 441 Gene3D Ribonuclease Inhibitor 57 184 IPR032675 -
Amo19g1302 441 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 188 431 IPR044812 GO:0019199|GO:0045087
Amo19g1302 441 MobiDBLite consensus disorder prediction 1 27 - -
Amo19g1302 441 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 188 431 - -
Amo19g1302 441 Pfam Protein tyrosine and serine/threonine kinase 288 419 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1302 Amo-Chr19 26260585 26264821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1302 182 424 Receptor kinase-like Gene Family AT3G21630 54.331 3.87e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo19g1302 PK_Tyr_Ser-Thr 1.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1302 - K13429 gmx:100776847 322.398