Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1296 ATGCAGGGATTGGACACAATGGTTGGTGAGCATGGAGTTCAGTTGTCCGGGGGACAGAAGCAGCGCATTGCCATAGCGAGAGCGATCCTGAAAGATCCAAGGATTCTGCTTCTAGATGAAGCCACAAGTGCACTGGATGCAGAGTCCGAAAGGGTAGTGCAAGAGGCTCTAGATAGGATCATGGTTAACCGAACTACTGTGGTAGTCGCGCATCGCCTGAGCACGGTGAGGAATGCTGAAATGATTGCTGTGATTCATAGAGGGAAGATGGTTGAGCAAGGTACACACCTAGAATTACTCAAGGATCCTGAGGGAGCTTACTCTCAGCTTGTACGCTTACAACAAGTAAACAAGGAATCAAAAGAAAGTGAGATCATCAAAGCAAGAATGAACTTTCATCAGAGTCTTTTAGACAATCCAGTCAAAGGAAATCACTCCAAAGATCTATCAGCAGGGGATCATCGATAG 468 0.4637 MQGLDTMVGEHGVQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNAEMIAVIHRGKMVEQGTHLELLKDPEGAYSQLVRLQQVNKESKESEIIKARMNFHQSLLDNPVKGNHSKDLSAGDHR* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1296 155 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 2 121 - -
Amo19g1296 155 Gene3D - 2 115 IPR027417 -
Amo19g1296 155 Pfam ABC transporter 4 43 IPR003439 GO:0005524
Amo19g1296 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 115 IPR027417 -
Amo19g1296 155 MobiDBLite consensus disorder prediction 136 155 - -
Amo19g1296 155 PANTHER - 2 121 - -
Amo19g1296 155 Gene3D ABC transporter type 1, transmembrane domain 116 129 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1296 Amo-Chr19 26133162 26133712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1296 3 146 Calmodulin-binding Proteins AT2G36910 54.422 8.27e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1296 K05658 - mnt:21397042 221.09