Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1293 ATGGAGCCAGTAAGTTTGACTTCACCGTGCAGAATGATGGTGATCAAGTCACGCTCAAGACCAAGATTGTTACTGCCAAGATCACTGGCATGCTCTTTGACGAAGACCTACTCACGATTTACACCATTGATAAGGTTTTGCTTCCCAGGGAGCTTTTTAAGGCCCTGGCTCCGTCTCCTTCGCCCGCGGCCGCACCGGAGCCAGTGTCGCGAACGCTCTTGCATCCCCGAAGAAAGAGGAAAAGAAGAAGAAGCAGAAGGCATCCGAGCACCGGAAGATGAGAAATCAGCGCCTGCGAATTCGCCCAGTGATGCCACCGATGACAGCGCTGACGACGGTAACGGCGCTGTTAGGTTTGACGGCGTCAGGTACGGTAACGGAGGAGGATGGTGCAATGATGTATCTACTTGCCTTWAACGCAAGGACACTCGCTTAGATTTCTACAACTGGAACAGAATCAAGATTAGGTACTGTGATGGATCATCATTTACTGGTGATATGGAAAAAGTTGATCCA 516 0.5019 MEPVSLTSPCRMMVIKSRSRPRLLLPRSLACSLTKTYSRFTPLIRFCFPGSFLRPWLRLLRPRPHRSQCRERSCIPEERGKEEEAEGIRAPEDEKSAPANSPSDATDDSADDGNGAVRFDGVRYGNGGGWCNDVSTCLXRKDTRLDFYNWNRIKIRYCDGSSFTGDMEKVDP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1293 172 PANTHER PECTIN ACETYLESTERASE 146 172 - -
Amo19g1293 172 PANTHER NOTUM-RELATED 146 172 IPR004963 GO:0016787
Amo19g1293 172 MobiDBLite consensus disorder prediction 71 118 - -
Amo19g1293 172 Pfam Pectinacetylesterase 146 171 IPR004963 GO:0016787
Amo19g1293 172 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1293 Amo-Chr19 26065913 26066962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1293 111 172 Carbohydrate Esterase AT5G45280 44.186 3.98e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1293 K19882 - ncol:116253311 86.2705