Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1292 ATGAGCATCCTTTTGCAGGCTATATTTCAAAATACATCTTCTGAAGTAGTTAAGGATAAAACCGGCAATAACACAATATTGGGAACACCAACAGAATCATCATTGTTGGAATTTGGTTTGCTCGAAGGTGGTGATTTTGATGCACAGCGCAATACCTATAAGATAATCAAGGTTGAGCCTTTCAATTCAGTTCGGAAGAAGATGTCTGTGCTTGTGAGTCTTCCTAATGGAGGGGTCAGAGCTTTCTGCAAAGGAGCATCAGAAATAATATCAAGAATGTGTGAAAAAATCATTGATTCTAATGGAAATGATGTTGATCTTCCTGAAGAACAGGCGGATAAAGTTAATGCTTTGAGAACTCTTTGTGTGGCTGTTAAAGATATAGATGCAACAGAAGGGAAAAACAGTATCCCTAATAATGGCTATACTCTGATAATAGTTGGTTTAAAAAGAGAGTTTGTATTAACATATGTAATTCTAGCTGCCACCGCGATTCACATGTTGTAA 507 0.3688 MSILLQAIFQNTSSEVVKDKTGNNTILGTPTESSLLEFGLLEGGDFDAQRNTYKIIKVEPFNSVRKKMSVLVSLPNGGVRAFCKGASEIISRMCEKIIDSNGNDVDLPEEQADKVNALRTLCVAVKDIDATEGKNSIPNNGYTLIIVGLKREFVLTYVILAATAIHML* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1292 168 Pfam Cation transport ATPase (P-type) 13 97 - -
Amo19g1292 168 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 3 132 IPR023299 GO:0000166
Amo19g1292 168 PANTHER CATION TRANSPORTING ATPASE 1 150 - -
Amo19g1292 168 PANTHER CALCIUM-TRANSPORTING ATPASE 1 150 - -
Amo19g1292 168 Gene3D - 1 150 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1292 Amo-Chr19 26064352 26064975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1292 2 150 Primary Pumps ATPases AT2G41560 57.233 4.98e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1292 K01537 - qsu:111995623 210.305