Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1281 ATGAAAGGAAAGATAATAATTTCTGCCACCTGTCTCATCCTCGTGGTGGGTGTGGTCATCGGAGCGGTGCTTATTGCAAACAAGGATGACTCCGGTGCTGACAACATTGAACTTCATGATAAGGCCATTGCCACAATGTGCCAAAACGTTCTCAACCAAACTCTTTGCCATGACATCTTGGGCCCAGTGAAGGGAACCACAGACCCCAATGAATTCATTGCGGCCGCAGTGAAAGCCGCCACGGAAAGCGTCATCAAGGCCTTGAACATGAGTGACAGGCTAACAGTTGAAAAAGGAAACGGCAACCCAGGCATCAAGATGGCACTGGAGGATTGCAAAGACCTCTTGCAATCAGCCATGGACAGTCTCCAACTTTCAACATCGTTGGTGGACAGCAAGAATATCCAGAAAATTCATGACCAGTCCGCCGACTTCAAGAATTGGCTAGGCGCTGTCATCTCCTACCAACAAACCTGCCTCGACAACTTCAACGAAACCGACAGCGGCGAGAAAGTCATCAAGGAACAGCTTAACGCAGAGACCCTAGACCAAGTTATGACCACAACAGGACTCACTCTTGATATCCTCGCCGACTTGGACAGGATCCTCGACCAATTCAACTTGAAGATCGACGTCCACCCTGGCTCTCGCCGCCTTCTAGCCGCCGATGTCGATGACCAAGGGCTCCCGACCTGGCTCTCTGCCTCAGACCGGGACCTCTTGGCCGAAGTCGATGTCCACTTGGCTAAGAGACACCTCCTAGCGAAGGTAAAGGGCAAGGCTAAGGGTAAGGGTAAGGGCAAGGGCAAGGGAAAAGGTAAAGCTATTGTTGCTGGTGCCGCTGCTGGTGCTGTTGCGGGTGCTGCAGTTGGTGCTGCTGCCGGTGGTGATCAGGTTAAATTCTCTCCTGGATCCATTGAACCGGTGACTCGAGGACCAGCCCATGTGGTGGTTGCTCAGGATGGAAGTGGCCGATTCAGGACTATCAAGGAAGCTATTGATTCTTACCCACCTGGCTTCAAGGGTAGATACGTCATTTACGTTAAGGCTGGTGTCTATAATGAGTACATTATTATTCCTAAGCATGCTGTGAACATTCTTATGTACGGTGATGGCCCTACAAGGACTATTGTCACTGGTCGTAAGAACTTTGTTGAAGGCGTGAAAACAATGCATACCGCCACTTTTGCCAATACTGCTGATGGATTCATTGCTAAGGCAATGAGATTCGAAAACACCGCTGGTCCGAAAGGACACCAAGCTGTGGCACTTCGAAACCAGGGAGACAAATCAGCTTTCTTCCAATGCCATATCTTTGGTAATCAAGACACCTTGTACGTCCAAACCAACCGTCAATTCTACCGGGACTGCGAAATCTCCGGCACCATTGACTTCATCTTTGGCACATCTCCAGCCTTGATCCAAAACAGCAAGATCATCCTGAGGAAGCCTGATGATAAACAATTCAACACTGTAACTGCCGACGGCACAACGCAACCCAACATGCCCACCGGAATCGTCCTCCAGAACTGTGAGATTGTCCCAGAGCCTGCTCTGTTCCCTGCGAGGTTCACCACCAAGTCATACTTGGGTAGGCCATGGAAGCCTTACTCAAAGACACTGATTATGGAATCAATGATCAGCGATGCCATTCACCCAGAAGGGTGGTTTCCTTGGGCTGGAACCGTGCACCTTGATACTTTGTGGTATGCTGAGTATGCAAATACTGGACCTGGTGCCAATGTTCAAGGAAGGATTAAGTGGAAGGGTTATCATGGCCTCATTAGTAGGAATGAAGCTGCACGGTTCACTGCTGCTGAATTTCTCAGAGGTGGACCCACTAGCGCTGCTGAACCATGGTTGAGTGCTACTGGCATTCCTTTTACCCTTGGCTTTACAAGGGCTTAA 1908 0.4979 MKGKIIISATCLILVVGVVIGAVLIANKDDSGADNIELHDKAIATMCQNVLNQTLCHDILGPVKGTTDPNEFIAAAVKAATESVIKALNMSDRLTVEKGNGNPGIKMALEDCKDLLQSAMDSLQLSTSLVDSKNIQKIHDQSADFKNWLGAVISYQQTCLDNFNETDSGEKVIKEQLNAETLDQVMTTTGLTLDILADLDRILDQFNLKIDVHPGSRRLLAADVDDQGLPTWLSASDRDLLAEVDVHLAKRHLLAKVKGKAKGKGKGKGKGKGKAIVAGAAAGAVAGAAVGAAAGGDQVKFSPGSIEPVTRGPAHVVVAQDGSGRFRTIKEAIDSYPPGFKGRYVIYVKAGVYNEYIIIPKHAVNILMYGDGPTRTIVTGRKNFVEGVKTMHTATFANTADGFIAKAMRFENTAGPKGHQAVALRNQGDKSAFFQCHIFGNQDTLYVQTNRQFYRDCEISGTIDFIFGTSPALIQNSKIILRKPDDKQFNTVTADGTTQPNMPTGIVLQNCEIVPEPALFPARFTTKSYLGRPWKPYSKTLIMESMISDAIHPEGWFPWAGTVHLDTLWYAEYANTGPGANVQGRIKWKGYHGLISRNEAARFTAAEFLRGGPTSAAEPWLSATGIPFTLGFTRA* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1281 635 Gene3D - 312 632 IPR012334 -
Amo19g1281 635 PANTHER PECTINESTERASE 306 633 - -
Amo19g1281 635 PANTHER PECTINESTERASE 3 247 - -
Amo19g1281 635 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 173 IPR035513 -
Amo19g1281 635 ProSitePatterns Pectinesterase signature 2. 459 468 IPR033131 -
Amo19g1281 635 CDD PMEI-like_3 45 201 - -
Amo19g1281 635 SMART PMEI_2 38 195 IPR006501 GO:0004857
Amo19g1281 635 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 180 IPR006501 GO:0004857
Amo19g1281 635 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 202 IPR035513 -
Amo19g1281 635 PANTHER PECTINESTERASE 306 633 - -
Amo19g1281 635 PANTHER PECTINESTERASE 3 247 - -
Amo19g1281 635 SUPERFAMILY Pectin lyase-like 313 630 IPR011050 -
Amo19g1281 635 Pfam Pectinesterase 315 611 IPR000070 GO:0030599|GO:0042545
Amo19g1281 635 Pfam Plant invertase/pectin methylesterase inhibitor 42 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1281 Amo-Chr19 25669363 25672245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1281 1 632 Carbohydrate Esterase AT2G47040 34.222 1.01e-118 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1281 K01051 - gmx:100808559 548.125