Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1275 ATGGTTAATGCTGAACGCATGCATGTAATAATGCTTTCTAAGAAGCTGTTGGTTCTATTAGTGGTTCTCTCAGTTTCATCGTCATTGACTTCAGCATCTTTGACTGTGGGCTTCTATAAAAGAACATGTCCACATGCTGAGGCAATTGTGAGAAGCGCTGTGAACAAAGCCATTTCCCTTAACGAAGGAATTGCTCCTGCCTTGATTAGAATGCACTTTCATGATTGCTTTGTCAGGGGTTGTGATGGTTCTGTATTACTAGAATCCACTCCTGGAAACCCAGCTGAGAGAGACCACCCAGCCAACAACCCAAGTCTACGTGGCTTCCACGTCATCGAAGAAGCTAAGGCCCAAATAGAGTCCCTGTGCCCTGAAACGGTGTCGTGCGCAGATATTCTTGCCTTCGCCGCACGCGACAGCGCTTACAAATCCGGCGGCATTAACTACGCAGTACCGGCAGGCCGCAGAGACGGTCGAGTCTCCATCAGCCAAGAAGTAACAGAAAACTTGCCTGCACCAACCTTCAACGCCGACCAACTCATAACCAACTTCGCCAGAAAAGGCTTGTCCGCTGATGAACTCGTTACTCTCTCTGGAGCGCATTCCATTGGTGTATCTCATTGTTCTTCATTCTCGAACCGCTTATATACACCCTTGCCTCAAGACCCTCCTATGGACTCCCAGTTCTCCTCATTGTTGAAAACCAAGTGTCCTTCTAACGTTAATGGCGATGGTGGATTTGATCCGACGGTGGTGATTGACGCATTTACGCCAAAGCGGTTGGACAATAAGTACTATAAGGGATTGATGAAGCAGCGTGGGTTGTTGAGTTCGGATCAAGCGTTGTTGAGCAGTGAATCAACTAGCGAAATGGTGGTAAGCAATGCTAAACATGGTTTGCATTGGTCAGTGAAGTTTGCAAAGGCTATGGTGCGAATGGGGTCTATTGATGTGCTTACAGGCGAACAAGGCGAGATTAGGAGACACTATAATTTAATATTTATGCTAACTAAAATTATTAAAAATTATTGGCCTTCAAGAATTTTAATTAGTTTATTGTTTCGAAAATATTTTGATACAAATAAGATGAATCGAAATAAGTTGTATGGCCTTTTTGAGAAGATGATAAAGTTAAAAGTAATCGGCTCTAATTTAAGTTTCGATTGTTCTACCGATTGA 1179 0.4368 MVNAERMHVIMLSKKLLVLLVVLSVSSSLTSASLTVGFYKRTCPHAEAIVRSAVNKAISLNEGIAPALIRMHFHDCFVRGCDGSVLLESTPGNPAERDHPANNPSLRGFHVIEEAKAQIESLCPETVSCADILAFAARDSAYKSGGINYAVPAGRRDGRVSISQEVTENLPAPTFNADQLITNFARKGLSADELVTLSGAHSIGVSHCSSFSNRLYTPLPQDPPMDSQFSSLLKTKCPSNVNGDGGFDPTVVIDAFTPKRLDNKYYKGLMKQRGLLSSDQALLSSESTSEMVVSNAKHGLHWSVKFAKAMVRMGSIDVLTGEQGEIRRHYNLIFMLTKIIKNYWPSRILISLLFRKYFDTNKMNRNKLYGLFEKMIKLKVIGSNLSFDCSTD* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1275 392 Pfam Peroxidase 50 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 Gene3D Peroxidase, domain 2 171 313 - -
Amo19g1275 392 PANTHER PEROXIDASE 25-RELATED 23 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 Gene3D - 37 330 - -
Amo19g1275 392 SUPERFAMILY Heme-dependent peroxidases 34 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PANTHER PEROXIDASE 23 329 - -
Amo19g1275 392 ProSiteProfiles Plant heme peroxidase family profile. 33 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 CDD secretory_peroxidase 36 329 IPR033905 GO:0004601|GO:0042744
Amo19g1275 392 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g1275 392 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Amo19g1275 392 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1275 Amo-Chr19 25554970 25557932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1275 12 327 Peroxidase AT5G42180 45.031 2.02e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1275 K00430 - twl:120004572 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1275 19 25554970 25557932 Amo19g1275 19 25554970 25557932 ECH