Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1261 ATGGAAGGCTGGTATTCAAGCTTCAGATGGAAGAGAGTAACGATGGAGGATTTTTATGATATTAAAACATTGAAGATTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTAGTTCTCGTGCTGCAGAGTATTTGAAAGAGCATATCTTTGATAATCTCATGAAATATTCAAATTATCAAGGGACTGATTCTCAATTTCTGGATTCTGAAAAAGACACTTTCTGGGATGATGGCTCTACTATTTCAACCGCTGTTTTAGTTGATAACCATCTCTATGTTGCTAATGTTGGAGATTCTGGGACTATAATATTGAAAGCTGGTAAAGCAATTGCTCTCTCAGGATCACAAGCCAAACAGAAGTGA 375 0.3653 MEGWYSSFRWKRVTMEDFYDIKTLKIGGHSVCLFGIFDGHGSSRAAEYLKEHIFDNLMKYSNYQGTDSQFLDSEKDTFWDDGSTISTAVLVDNHLYVANVGDSGTIILKAGKAIALSGSQAKQK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1261 124 ProSiteProfiles PPM-type phosphatase domain profile. 1 124 IPR001932 -
Amo19g1261 124 PANTHER ALPHABET, ISOFORM E-RELATED 5 118 - -
Amo19g1261 124 Pfam Protein phosphatase 2C 29 117 IPR001932 -
Amo19g1261 124 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 5 118 - -
Amo19g1261 124 Gene3D - 3 120 IPR036457 -
Amo19g1261 124 SUPERFAMILY PP2C-like 5 117 IPR036457 -
Amo19g1261 124 ProSitePatterns PPM-type phosphatase domain signature. 33 41 IPR000222 GO:0043169
Amo19g1261 124 CDD PP2Cc 5 117 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1261 Amo-Chr19 25286271 25286645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1261 5 117 PP2C-type Phosphatase Gene Family AT5G53140 67.200 1.06e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1261 K17506 - gmx:100805795 187.963