Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1258 ATGTCCTTCAATCAATCAAAGACCAATAGAAGCACAGCAGTGTACCGAAAATCTGAGCGATCCACCAGTTTCAATCAGCAGCAAGGTTCCTCATTTGCCTACGGCGGTGGCGGCATTAAGCCAACGCCATCGATTCCCTCATCTCCATCACTCTCCTCTAACCAGAGGTTTAACAAGAAGTCTAGCGATGCACAAGTTGGACAATCTAGAGTAAACCCCACCCCACTGAATGTAATAGAGTCTAACAGTGGTTCTGCTGCTCGAAACATACAGAATGGTGCCCATGTGCAACCTCAATTGCATGGAGCATCTGATGCTCCAGCTACTACCAAGCCATGTGAATCATCTGCTGTACAAGGGAGTACTGTAACTATTCCAAAAGTTCCAAGTTCTCAACTGCCCCCTGCAACTTCTGATCCAATTACTCCTGAAACTCCTACTAAGGGAGATGCATCAAAGTCATTCCCTTTCCAATTTGGATCTATTAATCCTAGCATTATGAATGGGATGACAGGCCCTACTAGTATAAGCTCAGCTCGTCCTAATATAGATGAGCAGAAGCAGGATCAGGCTTCAGTGCCAACATCTCTTATTCCAAAACAACAACTATCACCAAGAAAAGATGCAAGCGTCATTGAGCAATCTATTGATGGGGAAACTAATATACAAACTAAGGCAAAAAAGGATCTTCGCGTGCCGACTGCAACCTCAGCAAACCAAATGCAGAATCCTTCTATTATTCCTATAACTGGGATTTCAAACTCAACACCATATCACCTGTCACGAGCATCTTTACAGTTTGGTAGTTCTAATCCACATATTCAATCTCAGGGGTTGCCTACAACATCTCTCCAGATGCCTATACAAATGGCTTTGCCAATTGGAAATACTACACAAGTGCAACAGCCAATTTTTATTCCAAGTCTTCAACCTCGTCCAATGCAACCTCAGGGGATCATGAATCAAGGTCAAAACATGACTTTTACTCCTCAAATGGGGCATCAGTTGTCACATCAATTAGGCAATGTGGGTATTAGTATGATTCAACAATATCCCCAACAACATGGACAAAAATATCAACCTGGTCCTCGAAAAACAACTCATGTGAAGATCACTCACCCCGAGACTCATGAAGAGTTGAGACTTGATAAAAGAGCAAATGCATATTCAGATGGGTCATCTAATTCCAGGTCACATCCTAATATCCCTTCCCAATCCCAACCTGGTCAATCTTTTGCAGCTTATCCAATGAATTATTATTCCCCCAACTCTTATAGTACTAATTCTCTCTATTACCATCCTCCCAATCCTCTCCCACTAACAAGTAGCCAAAATACTGCTAATTTGCAACCACAAAGATTCAATTATCCATTGAATCATGGTTCGCAAAATGTTGGTTTCTTGAATTCAATGCAACATAGCTCTCTGTTTGCTAATAAAACAGGTGCTTCTATTCTTGGTAGTGTTGAACCCCCAATTTTAGAAAATTTTCATGATATTCCTAATTTAATGTCATTAACTGGAGCTGCTCCTGTGACAATTAGACCATGTGATGCATCTGATGTTGTAGACACATCATTGTCCAATTCTGGTAATTCTGGCGTTCAAAACCGAGAACCCAATATTTCGGTAGCATCATGTGATTCGGGCTCCCCTGCATTACAAAATGTATCTGAAACTAGTCCAGAAATTTCTTCACAGCAATCAAAATTATTTGGTAACTCTTTTGTGCAACAAAAACAATCACCTGGATCTGTTTTTGTATCTATTGAGAAGCTTGCAGCCACTCCCTTGTCACAACCTTCATCAGTAATGACTGAAGATCATGCCTCACTTGTGTCTAGAAGGAAGGAAACTCTAACTAGGTCAAATTCTTTGAAGGAAAATCCAAAGAAACTAGAGAAGAGCGCCCAATCACATCATCAGGCAGTTTCTATTCAATCTCCATCAATGGATAATGTTGCTTATCAAGCTATTGATAATGATATGCAGTCAGTTGATATTCTGGAGACAACCTCAAATCATGTCAAGAATAGTTCAGATACTTTTTGCAATGACTCTCTGTCTTTTTTGACATCTAGTGCCAACGATAAACCAATTTCAGAACCAAATAAAGTAAAAGCTACATCTAAAGGTAATAAGAAAAGAAGAGAGATTCTTCGAAAAGCTAATGCTGCTGGGTCAACTTCTGATCTTTATAACGCATACAAGGGACCAAAGGAAAAGAAAGAAACTATTTTCAGTTCAGAAAGCACAAACAATGCTTCTTCATCTGAAAGTTTGAAGCAGGTATCTACAGATGCTGCTCACCTAGATCTTAAAGTGAGTGAGAAATGTCAACAGAGTAAAGTTGAGCCTGATGATTGGGAGGATGCTGCTGACATGTGTACATCAAAACTGGAAGTTGATGACAAATTTCAACTGATTAGTGATGTTAACAGAGGTGTAGCCAAGAGGTACTCTCGAGATTTTCTTTTGAAATTTGCAGAGCAGTGCACTGATCTTCCTGAAGGTTTTCAGATCACAGTTGACATAGCTGAGGCTTTAATGAGTTTTACTATTGTAGATAGGCCTAGTGGAATGCCTTGGATGGATTATTGTGGAACTGGTGTAAATGAGGAAGAGAGGTGGAGTAAATCTTCTAATACTTTTCATTCTGGAAGACGTGGTTTGGATGTTGGTGGAGGTAATGTAGGTTTTCGATCTGGTCCAGGAAACAATTTTGGTGCTTTAAGGAACTTCCGTGGAGAGACACCTATTCAATATGCTGGAGCAGGGGTCCTTTATGGACCGACGCAATCCATGGGAATTCCAAGTGGAATGCAAAGAAACAGTAATGGAGAAAGGTGGCAGCGTTCTGTTAGCTTCCAGCACAAGGGGTTAATTCATTCTCGTACTCCTCAAACTCCTTTACAGACGATGCATAAGGCTGAGAGGAAGTATGAAGTGGGTAAAGTTTCGGATATAGAAGAGGCAAAACAGAGGCAGCTGAAAGCTATCTTGAACAAATTAACTCCTCAGAATTTTGAGAGGCTCTTTGAACAGGTAAAAGTGGTTAATATTGACAATGCTATCACCCTTACTGGTGTCATCTCACAAATTTTTGAGAAGGCTTTGATGGAGCCTACCTTTTGTGAAATGTATGCCAACTTCTGTTTACATTTGGCTTCTGAGTTGCCTGATTTCAGTGAGGACAATGAAAAGATAACTTTCAAAAGATTATTATTAAACAAGTGTCAAGAGGAATTTGAGAGAGGTGAAAGAGAGCAAGAAGAAGCAAATAAGGCTGATGAAGGTGAAGTTAAGCTATCTGATGAAGAAAGGGAAGATAGAAGAGTCAAGGCAAGAAGACGCATGCTAGGTAATATTAGATTAATTGGTGAGCTATATAAGAAGAGAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTTGGTCAATATCAGGATCCTGATGAAGAAGATATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGACATGATTGATCATCCCAAAGCCAAAAAACATATGGATGCATACTTCGAAAGGATGAAACTATTGTCAGACAACATGAATTTATCATCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGGGAAAATAAATGGCAACAAAGGAGAAAAATTGAAGGTCCAAAGAAGATTGAGGAAGTGCATAGAGATGCAGTGCAAGAGAGGCAGGCCCAAGCTGGTAGGTTAGGTCGTGGTCCAAGCAACAACCAAACATCAAGAAGAAACCCTGTGGACTTTCGTCCAAGAGGATCTCTGGTGTCATCTACAACTGCTCAAATTGGAGTACCGCATGGGTTACCTGGTCAAGTTCGTGGGTTTGGTTCTCAGGATGCTTGTTCTGAAGAGAGGCAATCTTTTGAGGCTAGGACCTTGTCTCCAAGAGCCTTGGGGGATGATTCTATTACCTTGGGACCCCAGGGCAGTTTGGCTAGGGGAATGTCCATTAGAGGATCAACTGCAATTGTAAGTTCATCGATGCCTAATGCAATTCCTACCTCAGTAGACTCTTCCAAAGCAACTGGTGTTCTTAACGGTTATGGGGATTTATCAGAGCGTGCACCATACCTTATGGACAGGTTTTCAGGTCCAGCTGCTTATGATCAATCAAGTGCTCTAGAGCATAATATAGGCTTAGACAAAAAAGATTTGAGTACTTCATATCGGGGACTTGACAACCTTGTTGCAACTTCACCATCTGATCAATTGCAAGGGTCAATAGTTTCTCAGGTTCCTTCTTCAGAAAAGGTTCGGTCAGAAGAACAACTCCGAGACATGTCCATGGCAGCAATCAAAGAATACTACAGTGCTAGAGATGAGAAGGAAGTTGCTCTCTGTGTCAAAGAATTAAACTCTCCATGCTTCCATCCTTCCATGGTTTGTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACAGAACGAGACCTTTTGGCCAAATTGCTAGTTCACCTTGTGAAATCACATGATGGTATCTTGAGTCAAGCACAGCTTATCCAAGGGTTTGAGTCTGTTCTCAGTACATTGGAGGATGCTGTTAATGATGCTCCCAAAGCACCAGAGTTTCTTGGACGTCTTTTTGCGAAAGGTATAATAGAGTCTGTTTTCTCTTTGAATGAGATTGAGCGGTTATTACGTGATGGAGGGGAGGAACCAGGCAGCCTCTTAGAAACTGGACTTGCAGCTGATGTTCTTGGAAGTACCTTAGAGGTAATAAAATTCGAGAAGGGGGACGCAATTTTACGTGATATCTGTGTTGGCTCTAACTTGCAATTGGAGACTTTCCGTCCACCAAATCCTACAACTTCAATAAAGCTAGAGAGATTTATTTAG 4884 0.4099 MSFNQSKTNRSTAVYRKSERSTSFNQQQGSSFAYGGGGIKPTPSIPSSPSLSSNQRFNKKSSDAQVGQSRVNPTPLNVIESNSGSAARNIQNGAHVQPQLHGASDAPATTKPCESSAVQGSTVTIPKVPSSQLPPATSDPITPETPTKGDASKSFPFQFGSINPSIMNGMTGPTSISSARPNIDEQKQDQASVPTSLIPKQQLSPRKDASVIEQSIDGETNIQTKAKKDLRVPTATSANQMQNPSIIPITGISNSTPYHLSRASLQFGSSNPHIQSQGLPTTSLQMPIQMALPIGNTTQVQQPIFIPSLQPRPMQPQGIMNQGQNMTFTPQMGHQLSHQLGNVGISMIQQYPQQHGQKYQPGPRKTTHVKITHPETHEELRLDKRANAYSDGSSNSRSHPNIPSQSQPGQSFAAYPMNYYSPNSYSTNSLYYHPPNPLPLTSSQNTANLQPQRFNYPLNHGSQNVGFLNSMQHSSLFANKTGASILGSVEPPILENFHDIPNLMSLTGAAPVTIRPCDASDVVDTSLSNSGNSGVQNREPNISVASCDSGSPALQNVSETSPEISSQQSKLFGNSFVQQKQSPGSVFVSIEKLAATPLSQPSSVMTEDHASLVSRRKETLTRSNSLKENPKKLEKSAQSHHQAVSIQSPSMDNVAYQAIDNDMQSVDILETTSNHVKNSSDTFCNDSLSFLTSSANDKPISEPNKVKATSKGNKKRREILRKANAAGSTSDLYNAYKGPKEKKETIFSSESTNNASSSESLKQVSTDAAHLDLKVSEKCQQSKVEPDDWEDAADMCTSKLEVDDKFQLISDVNRGVAKRYSRDFLLKFAEQCTDLPEGFQITVDIAEALMSFTIVDRPSGMPWMDYCGTGVNEEERWSKSSNTFHSGRRGLDVGGGNVGFRSGPGNNFGALRNFRGETPIQYAGAGVLYGPTQSMGIPSGMQRNSNGERWQRSVSFQHKGLIHSRTPQTPLQTMHKAERKYEVGKVSDIEEAKQRQLKAILNKLTPQNFERLFEQVKVVNIDNAITLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSDEEREDRRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGDMIDHPKAKKHMDAYFERMKLLSDNMNLSSRVRFMLKDAIDLRENKWQQRRKIEGPKKIEEVHRDAVQERQAQAGRLGRGPSNNQTSRRNPVDFRPRGSLVSSTTAQIGVPHGLPGQVRGFGSQDACSEERQSFEARTLSPRALGDDSITLGPQGSLARGMSIRGSTAIVSSSMPNAIPTSVDSSKATGVLNGYGDLSERAPYLMDRFSGPAAYDQSSALEHNIGLDKKDLSTSYRGLDNLVATSPSDQLQGSIVSQVPSSEKVRSEEQLRDMSMAAIKEYYSARDEKEVALCVKELNSPCFHPSMVCLWVTDSFERKDTERDLLAKLLVHLVKSHDGILSQAQLIQGFESVLSTLEDAVNDAPKAPEFLGRLFAKGIIESVFSLNEIERLLRDGGEEPGSLLETGLAADVLGSTLEVIKFEKGDAILRDICVGSNLQLETFRPPNPTTSIKLERFI* 1628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1258 1627 MobiDBLite consensus disorder prediction 612 646 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 1 33 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 99 157 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 374 415 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 1224 1328 - -
Amo19g1258 1627 Gene3D - 994 1229 - -
Amo19g1258 1627 SMART ma3_7 1440 1554 IPR003891 -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 43 84 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 1224 1240 - -
Amo19g1258 1627 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 692 1617 IPR045208 GO:0003743
Amo19g1258 1627 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 128 443 IPR045208 GO:0003743
Amo19g1258 1627 MobiDBLite consensus disorder prediction 1247 1280 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 109 157 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 1 84 - -
Amo19g1258 1627 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 692 1617 - -
Amo19g1258 1627 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 128 443 - -
Amo19g1258 1627 SUPERFAMILY ARM repeat 1435 1624 IPR016024 -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 388 415 - -
Amo19g1258 1627 SUPERFAMILY ARM repeat 990 1218 IPR016024 -
Amo19g1258 1627 Gene3D - 1431 1627 - -
Amo19g1258 1627 Pfam MA3 domain 1444 1551 IPR003891 -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 612 638 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 694 716 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 744 763 - -
Amo19g1258 1627 Pfam MIF4G domain 994 1216 IPR003890 GO:0003723|GO:0005515
Amo19g1258 1627 MobiDBLite consensus disorder prediction 1086 1107 - -
Amo19g1258 1627 SMART if4_15 994 1216 IPR003890 GO:0003723|GO:0005515
Amo19g1258 1627 MobiDBLite consensus disorder prediction 748 763 - -
Amo19g1258 1627 MobiDBLite consensus disorder prediction 172 209 - -
Amo19g1258 1627 ProSiteProfiles MI domain profile. 1439 1563 IPR003891 -
Amo19g1258 1627 Coils Coil 1076 1096 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1258 Amo-Chr19 25207835 25221165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1258 1 475 Eukaryotic Initiation Factors Gene Family AT3G60240 38.095 2.09e-66 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1258 K03260 - gmx:100798562 1809.27