Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1253 TTCACACTATACTATTGTCGCTTCGACATTCAATTGTTCCTCTTCATAGTCTTCTCTCTCTTCCTCTCTTCTCGTCTGTCACCGCACGAACAGTATAGTCGCTTTCTCTCTCCGACCCTGCGAGACCGAGCGATCCAATTCCTCCGCACCACCATGTTCCGCCGAGCAACTACCCTCCTCCGCCGCCCACTGATAGGCGCTACATCCCGCCGATTCTCGACGGATCTGCCGGCGGCGGCCGTAGAGGATTCGAGCTTCGTGGAGGCATGGAAGAAAGTGAGCCCAAACGTGGATCCACCAAAGACTCCATTGGCTTACATGAAGCCTCGCCCAGCCACTCCTTCTTCCCTTCCTTCCAAGCTCACTGTCAACTTCGTCCTTCCTTACGCTTCCGAACTCTCCGCTAAAGAGGTTGACATGGTCATAGTACCTGCAACAACCGGGCAAATGGGTGTTCTCCCTGGACACGTTGCAACAATTGCAGAGTTGAAACCTGGTGTCCTATCCGTTCACGAAGGCAATGATGTGACCAAGTACTTTGTCAGCAGTGGCTTTGCCTTCATCCATGCGAATTCTGTTGCTGATATAATAGCTGTTGAAGCTGTACCAGTAGATCGAATTGATGCAAACTTAGTCCAGAAGGGACTTCAAGATTTCACTCAGAAGCTGAATTCGGCCACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGAGTTGATGTCCATAGTGCTCTCAACTCGGCTCTTACAGGCTGA 756 0.5079 FTLYYCRFDIQLFLFIVFSLFLSSRLSPHEQYSRFLSPTLRDRAIQFLRTTMFRRATTLLRRPLIGATSRRFSTDLPAAAVEDSSFVEAWKKVSPNVDPPKTPLAYMKPRPATPSSLPSKLTVNFVLPYASELSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQDFTQKLNSATTDLEKAEAQIGVDVHSALNSALTG* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1253 251 Hamap ATP synthase epsilon chain [atpC]. 119 239 IPR001469 GO:0015986|GO:0045261|GO:0046933
Amo19g1253 251 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 121 193 IPR020546 GO:0015986
Amo19g1253 251 Gene3D - 208 250 - -
Amo19g1253 251 Coils Coil 216 236 - -
Amo19g1253 251 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 52 251 - -
Amo19g1253 251 CDD F1-ATPase_delta 121 244 IPR001469 GO:0015986|GO:0045261|GO:0046933
Amo19g1253 251 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 121 202 IPR036771 -
Amo19g1253 251 Gene3D - 110 207 IPR036771 -
Amo19g1253 251 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 52 251 IPR001469 GO:0015986|GO:0045261|GO:0046933
Amo19g1253 251 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 133 236 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1253 Amo-Chr19 25169893 25173787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1253 52 251 Primary Pumps ATPases AT5G47030 72.683 4.06e-108 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1253 K02134 - gmx:100780778 344.739