Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1251 ATGTCGAAGGACAAAGACTTTACCGATGTTTCGCTCACCTTCAAATACCTCTTAGGTTATCAAAGAAGTGTTACTAATGGTAAGCTTCAAAAAAAGATGAATGATGAAAAAAAAAAGATTACAAGCAATCCAACTCTGAAGCCCGTGGCCGACTTTGTCCATCTCCTCCGCAAACAAAAGCACTTACTTGTCTGGTCTGATTTTCATGTAAGAGACGGCATTGCCATATACATTTACAAACCTTATAAAAGAATGAAAATTGATGCTAGAAGAAAGGCAGAGGCATCAAGCAATAGCCAATTTCTTGCAAACATGAGCCATGAATTGAGGACACCTATGGCTGCAATAATTGGGCTACTTGACATTCTTATGTCCAACGACTGTCTAACCAACGAACAGTGTGCAACGGTTACTCAGATAAGAAAATGCTCGACGGCGCTGCTCCGGCTTCTTAATAACATCCTGGATCTCAGCAAGGTTCTTTTGTCAATTTGCTCAATGTTGACGGATCCCAACTCTGATGATCCTCTTGTCCCTGAAATTACGCACATGTACAAGACTGACAGGGCTAAGTATGAAGCTACTGCACGTAGCTGA 597 0.4137 MSKDKDFTDVSLTFKYLLGYQRSVTNGKLQKKMNDEKKKITSNPTLKPVADFVHLLRKQKHLLVWSDFHVRDGIAIYIYKPYKRMKIDARRKAEASSNSQFLANMSHELRTPMAAIIGLLDILMSNDCLTNEQCATVTQIRKCSTALLRLLNNILDLSKVLLSICSMLTDPNSDDPLVPEITHMYKTDRAKYEATARS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1251 198 Gene3D - 80 160 - -
Amo19g1251 198 PANTHER OSMOSENSOR HISTIDINE KINASE 87 160 - -
Amo19g1251 198 CDD HisKA 99 159 IPR003661 GO:0000155|GO:0007165
Amo19g1251 198 Pfam His Kinase A (phospho-acceptor) domain 97 159 IPR003661 GO:0000155|GO:0007165
Amo19g1251 198 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 94 159 IPR036097 GO:0000155|GO:0007165
Amo19g1251 198 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 24 198 IPR000608 -
Amo19g1251 198 PANTHER TWO-COMPONENT HISTIDINE KINASE 87 160 - -
Amo19g1251 198 SMART HisKA_10 97 163 IPR003661 GO:0000155|GO:0007165
Amo19g1251 198 Pfam Ubiquitin-conjugating enzyme 153 197 IPR000608 -
Amo19g1251 198 SUPERFAMILY UBC-like 154 197 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1251 Amo-Chr19 25081834 25086087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1251 86 160 Histidine Kinase Gene Family AT2G17820 87.013 2.31e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1251 - - ahf:112776726 310.457