Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1184 ATGGTGGCTGAAGCAGAGCTCGTGTGTCAACAGAGCGTGGCGTTGTTGGATGTGAAGTATTTTCCGAACAAAGGGACTGGAATTCACGAGATCGAAGACGTAGCACCCACTGCTATCTCGCCTCCGAGTTTTGACCGAGCTCGACCTTCTGAATCGGTCTCCGCTCAGTTACTCACTTCACAAGATGAAGCCGGACCTACCGAAAGAATCTCAGATGCAGCTCTTGAAAATGCTGTTCTGCAATTTGTTCCCTGCATCCGTTCTGGTAGTTTTGCTGATATTGGGCCACGAAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCGTCTCACCTTGGATCACTYCACACCTTTCCTAAACCGAGTGCTTTCTACGGGGTTTTTGACGGTCATGGAGGACCTGAAGCTGCAGCTTATGTAAGAAAAAATGTAATAAAATTCTTCTTTGAGGATGGTAGTTTCCCACAGACATCTGAAGTAGATAATGTGTTTCTGGAAGAGGTTGAGAATTCCCTAAGGAAAGCATTTCTTTCAGCTGACTCAGCATTGGCTGATGATTGCAGTGTGAACACGTCATCAGGCACCACGGCTCTCACTGCATTGGTGCTTGGAAGGCTTCTGATGGTGGCCAATGCTGGTGATTGCCGGGCAGTTCTCTGTCGTAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCTATATATGCATCAGAGCGGAGGCGAGTTGAAGAATTGGGCGGTTACATAGAAGATGGTTACCTTAATGGGGTTCTGTCCGTTACTCGAGCCCTAGGTGACTGGGACATGAAGTTACCAAAGGGTTCTTCCTCCCCTTTGATTGCAGAGCCTGAGTTCCGACAAATGGTCCTAACAGAGGACGACGAATTCCTCATCATAGGGTGTGATGGCATCTGGGATGTGATGTCAAGTCAGCATGCAGTTAGCCTTGTTCGCAAAGGTCTGAGGCGACACGATGACCCTGATAAATGRGCAAGGGACCTCGTCATGGAGGCATTGCGCTTGAACACATTTGACAACCTCACTGTTATCATTGTTTGCTTCTCTTCCCTTGACAACAATGAGTCCTCTACACCTCCGTCTCCACCTTGCCAGCGGAAAATTAGATGTTGCAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGAGTTTATTGGAAGGGAGTGCCAGCAACTAA 1203 0.4771 MVAEAELVCQQSVALLDVKYFPNKGTGIHEIEDVAPTAISPPSFDRARPSESVSAQLLTSQDEAGPTERISDAALENAVLQFVPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLHTFPKPSAFYGVFDGHGGPEAAAYVRKNVIKFFFEDGSFPQTSEVDNVFLEEVENSLRKAFLSADSALADDCSVNTSSGTTALTALVLGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYASERRRVEELGGYIEDGYLNGVLSVTRALGDWDMKLPKGSSSPLIAEPEFRQMVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPDKXARDLVMEALRLNTFDNLTVIIVCFSSLDNNESSTPPSPPCQRKIRCCSLSAEALCSLRSLLEGSASN* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1184 400 MobiDBLite consensus disorder prediction 38 64 - -
Amo19g1184 400 Gene3D - 74 364 IPR036457 -
Amo19g1184 400 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 380 - -
Amo19g1184 400 PANTHER PROTEIN PHOSPHATASE 2C 1 380 IPR015655 GO:0004722|GO:0006470
Amo19g1184 400 CDD PP2Cc 86 357 IPR001932 -
Amo19g1184 400 ProSiteProfiles PPM-type phosphatase domain profile. 87 357 IPR001932 -
Amo19g1184 400 Pfam Protein phosphatase 2C 97 349 IPR001932 -
Amo19g1184 400 SMART PP2C_4 77 355 IPR001932 -
Amo19g1184 400 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Amo19g1184 400 SMART PP2C_SIG_2 102 357 IPR001932 -
Amo19g1184 400 SUPERFAMILY PP2C-like 81 359 IPR036457 -
Amo19g1184 400 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1184 Amo-Chr19 23170015 23172875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1184 100 396 PP2C-type Phosphatase Gene Family AT3G62260 71.141 2.37e-155 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1184 K14803 - gmx:100819791 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1184 19 23170015 23172875 Amo19g1184 19 23170015 23172875 ECH